RNA–Protein interactions for RNA: ENST00000435702.1

AP001046.1-201, humanhuman

TSL 2 BASIC

Gene AP001046.1, Length 2,816 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001046.1-201ENST00000435702 MCCC2Q9HCC0 563 aa12.04□□□□□ -0.48
AP001046.1-201ENST00000435702 FGF20Q9NP95 211 aaPredicted RBP12.04□□□□□ -0.48
AP001046.1-201ENST00000435702 SPENQ96T58 3664 aaKnown RBP12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 PSKH1P11801 424 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 PEPDP12955 493 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 HIST1H1CP16403 213 aaKnown RBP12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 SKP2Q13309 424 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 VASNQ6EMK4 673 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 XKRXQ6PP77 449 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 RAB11FIP2Q7L804 512 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 ZNF550Q7Z398 422 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 NR2C2APQ86WQ0 139 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 RFLNBQ8N5W9 214 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 OR7G1Q8NGA0 311 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 PTP4A1Q93096 173 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 LPAR4Q99677 370 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 CMKLR1Q99788 373 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 NPFFR2Q9Y5X5 522 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 CCDC187A0A096LP49 1063 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 TMEM129A0AVI4 362 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 FRG2CA6NGY1 282 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 SNTNA6NMZ2 147 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 CENPXA8MT69 81 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 H3BML4 177 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 GABRPO00591 440 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 DDOSTP39656 456 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 MC2RQ01718 297 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 ZNF613Q6PF04 617 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 Q8N402 240 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 ZNF527Q8NB42 609 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 ZNF485Q8NCK3 441 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 NEIL3Q8TAT5 605 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 HOXB13Q92826 284 aaPredicted RBP12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 TMEM246Q9BRR3 403 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 NLKQ9UBE8 527 aa12.03□□□□□ -0.48
AP001046.1-201ENST00000435702 IGKV1D-42A0A075B6H8 117 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 KDM4EB2RXH2 506 aaPredicted RBP12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 SLC2A2P11168 524 aaPredicted RBP12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 GABRA5P31644 462 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 OTX2P32243 289 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 GPR143P51810 404 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 ASAH1Q13510 395 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 AADACL4Q5VUY2 407 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 ARSKQ6UWY0 536 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 MRGPREQ86SM8 312 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 TMEM99Q8N816 258 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 SLC37A3Q8NCC5 494 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 OR10G3Q8NGC4 313 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 OR6K6Q8NGW6 343 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 ENKURQ8TC29 256 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 SLC7A6Q92536 515 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 ATF6BQ99941 703 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 WDR77Q9BQA1 342 aaPredicted RBP12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 ZNF649Q9BS31 505 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 RNF32Q9H0A6 362 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 PPIL3Q9H2H8 161 aaKnown RBP12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 ENAMQ9NRM1 1142 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 KLRF1Q9NZS2 232 aa12.02□□□□□ -0.48
AP001046.1-201ENST00000435702 IRGMA1A4Y4 181 aa12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 BHLHE40O14503 412 aa12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 KLK3P07288 261 aaPredicted RBP12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 IL11P20809 199 aa12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 EVI2BP34910 448 aa12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 LTBQ06643 244 aa12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 THOC7Q6I9Y2 204 aaKnown RBP12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 RPTNQ6XPR3 784 aa12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 CPEB2Q7Z5Q1 589 aaKnown RBP12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 KIAA1143Q96AT1 154 aaPredicted RBP12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 SGTBQ96EQ0 304 aa12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 JSRP1Q96MG2 331 aaPredicted RBP12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 PELOQ9BRX2 385 aaKnown RBP12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 AKAP7Q9P0M2 348 aaPredicted RBP12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 GPN3Q9UHW5 284 aaPredicted RBP12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 GSTK1Q9Y2Q3 226 aa12.02□□□□□ -0.49
AP001046.1-201ENST00000435702 B4E171 279 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 TSPAN7P41732 249 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 EGR4Q05215 589 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 TOR1AIP2Q8NFQ8 470 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 Q96M85 177 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 RNF121Q9H920 327 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 SRA1Q9HD15 236 aaKnown RBP12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 KRCC1Q9NPI7 259 aaPredicted RBP12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 SLC6A5Q9Y345 797 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 EXOSC1Q9Y3B2 195 aaKnown RBP12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 BLACEA4D250 179 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 CPNE3O75131 537 aaKnown RBP12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 FGF5P12034 268 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 PYCR1P32322 319 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 ID4P47928 161 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 EIF3IQ13347 325 aaKnown RBP12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 RNASE12Q5GAN4 147 aaKnown RBP12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 TRIQKQ629K1 86 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 ZNF385CQ66K41 422 aaPredicted RBP12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 TMEM91Q6ZNR0 172 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 ARIH2OSQ8N7S6 290 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 TAAR8Q969N4 342 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 FRMD6Q96NE9 622 aa12.01□□□□□ -0.49
AP001046.1-201ENST00000435702 WACQ9BTA9 647 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms