RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 CD53P19397 219 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 HOXC12P31275 282 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 C9orf135Q5VTT2 229 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 SEZ6L2Q6UXD5 910 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 SPNS3Q6ZMD2 512 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 CBLL1Q75N03 491 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 GEMIN6Q8WXD5 167 aaKnown RBP14.29□□□□□ -0.12
SMPD4-207ENST00000435455 HS6ST2Q96MM7 605 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 PRSS27Q9BQR3 290 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 CXXC4Q9H2H0 198 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 NANSQ9NR45 359 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 SLC17A5Q9NRA2 495 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 ADA2Q9NZK5 511 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 ZNF229Q9UJW7 825 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 SLC25A15Q9Y619 301 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 PRRC2AP48634 2157 aaKnown RBP14.29□□□□□ -0.12
SMPD4-207ENST00000435455 KPNA4O00629 521 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-207ENST00000435455 ARID1AO14497 2285 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 GMNNO75496 209 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 OR6A2O95222 327 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 CH25HO95992 272 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 HPRP00739 348 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 IGF2P01344 180 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 HIST1H2ABP04908 130 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 IFNW1P05000 195 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 MNAT1P51948 309 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 SH3BGRP55822 239 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-207ENST00000435455 POU3F1Q03052 451 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-207ENST00000435455 PIN1Q13526 163 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-207ENST00000435455 ZNF74Q16587 644 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 DEFB113Q30KQ7 82 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 IFI44LQ53G44 452 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 GKAP1Q5VSY0 366 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-207ENST00000435455 HMBOX1Q6NT76 420 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 ADAM5Q6NVV9 412 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 KLHL17Q6TDP4 642 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 KLHL24Q6TFL4 600 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 HIST3H2AQ7L7L0 130 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 PXKQ7Z7A4 578 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 VTCN1Q7Z7D3 282 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 GPR137CQ8N3F9 429 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 PIK3C3Q8NEB9 887 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 ANKK1Q8NFD2 765 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 OR52N5Q8NH56 324 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 HIST1H2ACQ93077 130 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 PIGTQ969N2 578 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 FAM162AQ96A26 154 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 BOD1Q96IK1 185 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 PRRC1Q96M27 445 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 OR2M2Q96R28 347 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 TEP1Q99973 2627 aaKnown RBP14.28□□□□□ -0.12
SMPD4-207ENST00000435455 ARL8BQ9NVJ2 186 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 BEX4Q9NWD9 120 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-207ENST00000435455 NDE1Q9NXR1 346 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 RPS6KA6Q9UK32 745 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 AMDHD2Q9Y303 409 aa14.28□□□□□ -0.12
SMPD4-207ENST00000435455 MAGED1Q9Y5V3 778 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-207ENST00000435455 PLCE1Q9P212 2302 aa14.27□□□□□ -0.12
SMPD4-207ENST00000435455 HEATR1Q9H583 2144 aaKnown RBP14.27□□□□□ -0.12
SMPD4-207ENST00000435455 HS3ST1O14792 307 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 FAM107AO95990 144 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 WNT11O96014 354 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 PLAUP00749 431 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 SERPINA1P01009 418 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 MT-ND1P03886 318 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 ADORA3P0DMS8 318 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 AHCYP23526 432 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 BSPH1Q075Z2 132 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 ST3GAL3Q11203 375 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 ZP4Q12836 540 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 TMEM108Q6UXF1 575 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 FKBP9P1Q75LS8 142 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 NKAIN4Q8IVV8 208 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 PGAM4Q8N0Y7 254 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 TMEM123Q8N131 208 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 TMEM239Q8WW34 195 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 HSH2DQ96JZ2 352 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 ALKBH3Q96Q83 286 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-207ENST00000435455 PIP5K1AQ99755 562 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 OBP2BQ9NPH6 170 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 MEPEQ9NQ76 525 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-207ENST00000435455 MGAT4BQ9UQ53 548 aa14.27□□□□□ -0.13
SMPD4-207ENST00000435455 HTR3EA5X5Y0 456 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 DPRXA6NFQ7 191 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 C11orf98E9PRG8 122 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 RPL36A-HNRNPH2H7BZ11 118 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 CLOCKO15516 846 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 UPK3AO75631 287 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 UMPSP11172 480 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 HLA-DOBP13765 273 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 NCK1P16333 377 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 CDH2P19022 906 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-207ENST00000435455 PAX7P23759 505 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 ZNF83P51522 516 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 UGT2B15P54855 530 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 PRPS1P60891 318 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 MXRA7P84157 204 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 ROR2Q01974 943 aaKnown RBP14.26□□□□□ -0.13
SMPD4-207ENST00000435455 LGALS3BPQ08380 585 aa14.26□□□□□ -0.13
SMPD4-207ENST00000435455 KRT72Q14CN4 511 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms