RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 A0A1W2PR80 420 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 LIPT2A6NK58 231 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 AQP7P3A6NL99 342 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 A8MVM7 634 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 GKN3PP0CG01 181 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 FAM157CP0CG43 387 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 NTF4P34130 210 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 MNAT1P51948 309 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 UBE2NP61088 152 aaKnown RBP13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 NCALDP61601 193 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 PLAURQ03405 335 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 SPOCK1Q08629 439 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 CEACAM7Q14002 265 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 OR7A5Q15622 319 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 C9orf135Q5VTT2 229 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 HACD2Q6Y1H2 254 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 GPAT4Q86UL3 456 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 PTOV1Q86YD1 416 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 TREML1Q86YW5 311 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 WDR31Q8NA23 367 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 FAM53CQ9NYF3 392 aa13.03□□□□□ -0.32
RPUSD3-208ENST00000433972 RNF212BA8MTL3 300 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 ZNF587BE7ETH6 402 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 FXYD1O00168 92 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 NDUFS8O00217 210 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 MFN2O95140 757 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 C8BP07358 591 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 PTNP21246 168 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 GTF2E2P29084 291 aaKnown RBP13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 ACAA2P42765 397 aaKnown RBP13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 NUDT2P50583 147 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 PCBP3P57721 371 aaKnown RBP13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 RGS8P57771 180 aaPredicted RBP13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 SNRPD2P62316 118 aaKnown RBP13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 B3GLCTQ6Y288 498 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 ZNF525Q8N782 197 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 TMEM99Q8N816 258 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 CCDC197Q8NCU1 140 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 OR2T12Q8NG77 320 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 ZNF583Q96ND8 569 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 KCNK17Q96T54 332 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 C1QTNF6Q9BXI9 259 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 TMEM27Q9HBJ8 222 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 MYOZ1Q9NP98 299 aaPredicted RBP13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 RASD1Q9Y272 281 aa13.02□□□□□ -0.33
RPUSD3-208ENST00000433972 ELOVL7A1L3X0 281 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 ZC3H12DA2A288 527 aaKnown RBP13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 VSTM5A8MXK1 200 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 GSTA4O15217 222 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 GMNNO75496 209 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 AKR7A3O95154 331 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 F12P00748 615 aaPredicted RBP13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 CRYAAP02489 173 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 USF1P22415 310 aaPredicted RBP13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 PDLIM4P50479 330 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 GZMMP51124 257 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 SH3BGRP55822 239 aaPredicted RBP13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 C3orf36Q3SXR2 165 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 CYB5R2Q6BCY4 276 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 RANBP3LQ86VV4 465 aaPredicted RBP13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 CALHM3Q86XJ0 350 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 SMYD1Q8NB12 490 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 STK35Q8TDR2 534 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 C10orf105Q8TEF2 133 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 KATNB1Q9BVA0 655 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 BEX2Q9BXY8 128 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 ADPRHL2Q9NX46 363 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 NDE1Q9NXR1 346 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 TAGLN3Q9UI15 199 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 BAG5Q9UL15 447 aa13.01□□□□□ -0.33
RPUSD3-208ENST00000433972 A0A096LNT2 108 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 FAM220BPB1ANY3 271 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 SHOX2O60902 331 aaPredicted RBP13□□□□□ -0.33
RPUSD3-208ENST00000433972 PDE5AO76074 875 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 AHSA1O95433 338 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 ERCC1P07992 297 aaPredicted RBP13□□□□□ -0.33
RPUSD3-208ENST00000433972 HOXB1P14653 301 aaPredicted RBP13□□□□□ -0.33
RPUSD3-208ENST00000433972 CDH2P19022 906 aaPredicted RBP13□□□□□ -0.33
RPUSD3-208ENST00000433972 GZMKP49863 264 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 FOXG1P55316 489 aaPredicted RBP13□□□□□ -0.33
RPUSD3-208ENST00000433972 PSME3P61289 254 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 MXRA7P84157 204 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 C1orf140Q5VVS0 124 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 C5orf46Q6UWT4 87 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 CCDC80Q76M96 950 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 SLC15A3Q8IY34 581 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 ZNF540Q8NDQ6 660 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 ANKK1Q8NFD2 765 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 MAGEE2Q8TD90 523 aaPredicted RBP13□□□□□ -0.33
RPUSD3-208ENST00000433972 DNAJA4Q8WW22 397 aaPredicted RBP13□□□□□ -0.33
RPUSD3-208ENST00000433972 ZNF385AQ96PM9 386 aaKnown RBP13□□□□□ -0.33
RPUSD3-208ENST00000433972 SLC38A2Q96QD8 506 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 PIMREGQ9BSJ6 248 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 TESQ9UGI8 421 aaKnown RBP13□□□□□ -0.33
RPUSD3-208ENST00000433972 MOKQ9UQ07 419 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 FBN3Q75N90 2809 aa13□□□□□ -0.33
RPUSD3-208ENST00000433972 FREM1Q5H8C1 2179 aa12.99□□□□□ -0.33
RPUSD3-208ENST00000433972 ATP6V1G2-DDX39BF2Z307 99 aa12.99□□□□□ -0.33
RPUSD3-208ENST00000433972 FRS3O43559 492 aa12.99□□□□□ -0.33
RPUSD3-208ENST00000433972 AKAP8O43823 692 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms