RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 OR52I2Q8NH67 350 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 HAVCR1Q96D42 359 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 SLC25A38Q96DW6 304 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 DGAT2Q96PD7 388 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 MNTQ99583 582 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 SMAD5Q99717 465 aaKnown RBP10.32□□□□□ -0.76
USP4-205ENST00000431357 TCF7L1Q9HCS4 588 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 STARD5Q9NSY2 213 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 ANKRD10Q9NXR5 420 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 NKIRAS2Q9NYR9 191 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 FOXJ3Q9UPW0 622 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 ZNF175Q9Y473 711 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 ANKRD20A5PA0PJZ0 165 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ACOD1A6NK06 481 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 GRXCR1A8MXD5 290 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ACOT7O00154 380 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 CLDN4O14493 209 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 TOR1AO14656 332 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 FOXS1O43638 330 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 GMDSO60547 372 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 EGFP01133 1207 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 HPXP02790 462 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ICAM2P13598 275 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 CPN1P15169 458 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ATF4P18848 351 aaPredicted RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 RABIFP47224 123 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ART1P52961 327 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ZP1P60852 638 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 RAB14P61106 215 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ZNF267Q14586 743 aaPredicted RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 GRK1Q15835 563 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 WBP2NLQ6ICG8 309 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 PWWP2BQ6NUJ5 590 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 KIAA1324Q6UXG2 1013 aaKnown RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 TMEM184AQ6ZMB5 413 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 Q6ZSR6 202 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 NLRC3Q7RTR2 1065 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 BCORP1Q8N888 145 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 BMPERQ8N8U9 685 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 UXS1Q8NBZ7 420 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 OR2T35Q8NGX2 323 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 C1orf216Q8TAB5 229 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 SYNPRQ8TBG9 265 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 PATE1Q8WXA2 126 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 MIB2Q96AX9 1013 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 INTS12Q96CB8 462 aaKnown RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 RASD2Q96D21 266 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 MS4A3Q96HJ5 214 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 SPACA7Q96KW9 195 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 MRGPRX1Q96LB2 322 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 UTP23Q9BRU9 249 aaKnown RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 DPCDQ9BVM2 203 aaPredicted RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 GPN1Q9HCN4 374 aaPredicted RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 NPDC1Q9NQX5 325 aaPredicted RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 PRTFDC1Q9NRG1 225 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 HIF3AQ9Y2N7 669 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 OR10H1Q9Y4A9 318 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ELOA3DA6NLF2 546 aaPredicted RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 HSPB2A8KAH6 182 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 SRPX2O60687 465 aaPredicted RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 ZFPL1O95159 310 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 TXNDC12O95881 172 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 IL5P05113 134 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 SYPP08247 313 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 CD14P08571 375 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ADRB1P08588 477 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 CT45A8P0DMV1 189 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 CT45A9P0DMV2 189 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 IFNGR1P15260 489 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ADH7P40394 386 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 GPR3P46089 330 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 PTH2RP49190 550 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 NANOS3P60323 173 aaKnown RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 MRPS21P82921 87 aaKnown RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 ALKBH1Q13686 389 aaKnown RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 HSPB2Q16082 182 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ELOA3BQ3SY89 546 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 CT45A2Q5DJT8 189 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 EMC4Q5J8M3 183 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 TOR2AQ5JU69 321 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 TMEM69Q5SWH9 247 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 APOOLQ6UXV4 268 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 GLDNQ6ZMI3 551 aaPredicted RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 ELOA3Q8NG57 546 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 OR5AK2Q8NH90 309 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 SLC37A2Q8TED4 501 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 ADAD1Q96M93 576 aaKnown RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 TMEM106CQ9BVX2 250 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 SLC25A18Q9H1K4 315 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 CCDC86Q9H6F5 360 aaKnown RBP10.31□□□□□ -0.76
USP4-205ENST00000431357 CERS4Q9HA82 394 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 TAS2R10Q9NYW0 307 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 TAS2R5Q9NYW4 299 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 LRIT1Q9P2V4 623 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 PRODH2Q9UF12 536 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 OR5V1Q9UGF6 321 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 POMT2Q9UKY4 750 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 MAB21L2Q9Y586 359 aa10.31□□□□□ -0.76
USP4-205ENST00000431357 DOCK8Q8NF50 2099 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 TRBV5-5A0A0J9YX44 114 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms