RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 LOC105371242A0A075B767 164 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TMED7-TICAM2A0A0A6YYA0 188 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 GMNCA6NCL1 334 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 SCAMP2O15127 329 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 SHOXO15266 292 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 LGI1O95970 557 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 MT-ND5P03915 603 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 GAAP10253 952 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 ACHEP22303 614 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 CXCR1P25024 350 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 ECHS1P30084 290 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 THBS4P35443 961 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 CCT5P48643 541 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 FOXG1P55316 489 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 FOXA1P55317 472 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TUBA1BP68363 451 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TUBA4AP68366 448 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TEKQ02763 1124 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 IFFO1Q0D2I5 559 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 NKPD1Q17RQ9 610 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TRMT5Q32P41 509 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 C3orf36Q3SXR2 165 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 SLC9B1Q4ZJI4 515 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 ACSM5Q6NUN0 579 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 NIPAL3Q6P499 406 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 PAQR6Q6TCH4 344 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 FRMD7Q6ZUT3 714 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TUBA1AQ71U36 451 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TRMT10CQ7L0Y3 403 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 GPR137CQ8N3F9 429 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 OR9K2Q8NGE7 335 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 OR5D16Q8NGK9 328 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 OR1K1Q8NGR3 316 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 OR5AK3PQ8NH89 298 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 RDH5Q92781 318 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TMEM45BQ96B21 275 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TIMD4Q96H15 378 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 FMO2Q99518 471 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TXLNGYQ9BZA5 131 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 GSTO2Q9H4Y5 243 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 CCDC134Q9H6E4 229 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 PPCSQ9HAB8 311 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TREM2Q9NZC2 230 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TMEM216Q9P0N5 145 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 MID2Q9UJV3 735 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 ZNF346Q9UL40 294 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 MKLN1Q9UL63 735 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 TMED7Q9Y3B3 224 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 WDR45Q9Y484 360 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 PPIAL4AQ9Y536 164 aa6.78□□□□□ -1.32
ECHDC1-207ENST00000430841 ARPC4-TTLL3A0A0A6YYG9 625 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 RNF103-CHMP3A0A140T963 221 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 LYNX1G3V0Z9 82 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 J3QLI3 93 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 ETV2O00321 342 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 AZIN1O14977 448 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 GSC2O15499 205 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 GLRA3O75311 464 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 VAMP5O95183 116 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 MPZL1O95297 269 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 C6orf47O95873 294 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 LYNX1P0DP58 116 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 MATN1P21941 496 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 ARR3P36575 388 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 FRKP42685 505 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 RAD52P43351 418 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 IDH2P48735 452 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 ANXA11P50995 505 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 MAP2K6P52564 334 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 COPZ1P61923 177 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 UBA52P62987 128 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 IL13RA1P78552 427 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 RIN1Q13671 783 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 PDE7AQ13946 482 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 OR7A5Q15622 319 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 ZNF141Q15928 474 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 ATP6AP1LQ52LC2 224 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 GPAT3Q53EU6 434 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 ARMCX4Q5H9R4 360 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 PRAMEF8Q5VWM4 474 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 PRAMEF7Q5VXH5 474 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 LIPMQ5VYY2 423 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 CLEC6AQ6EIG7 209 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 KRTAP5-3Q6L8H2 238 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 TMEM154Q6P9G4 183 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 ZDHHC24Q6UX98 284 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 C1QL2Q7Z5L3 287 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 SNX32Q86XE0 403 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 CCDC36Q8IYA8 594 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 CDK20Q8IZL9 346 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 ZCCHC24Q8N2G6 241 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 OIT3Q8WWZ8 545 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 RAB8BQ92930 207 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 PPP3R2Q96LZ3 170 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 CCT8L2Q96SF2 557 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 SDF2Q99470 211 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 CCDC106Q9BWC9 280 aa6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 SF3B5Q9BWJ5 86 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-207ENST00000430841 DPY30Q9C005 99 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms