RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SPTSSAQ969W0 71 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 SDSLQ96GA7 329 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 OR52D1Q9H346 318 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 CORINQ9Y5Q5 1042 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 IFNA2P01563 188 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 CHRM4P08173 479 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 APEHP13798 732 aaKnown RBP11.84□□□□□ -0.51
PTCH1-207ENST00000429896 NID1P14543 1247 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 GLO1Q04760 184 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 DUSP8Q13202 625 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF829Q3KNS6 432 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-207ENST00000429896 C1orf140Q5VVS0 124 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 UGT2A3Q6UWM9 527 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 GFRALQ6UXV0 394 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 B3GNT8Q7Z7M8 397 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 SSX3Q99909 188 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 TSPAN10Q9H1Z9 355 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-207ENST00000429896 HYAL3O43820 417 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-207ENST00000429896 CBR3O75828 277 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 MAPK3P27361 379 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF81P51508 661 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 HSD17B12Q53GQ0 312 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 VHLLQ6RSH7 139 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 MBOAT2Q6ZWT7 520 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 SPAG16Q8N0X2 631 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 PIAS4Q8N2W9 510 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-207ENST00000429896 MAFIPQ8WZ33 124 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 THRSPQ92748 146 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF775Q96BV0 537 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-207ENST00000429896 ARL5BQ96KC2 179 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 TRBV2A0A0J9YWF9 115 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 FIGNL2A6NMB9 653 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF195O14628 629 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 IFNA7P01567 189 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 RFC3P40938 356 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 LSAMPQ13449 338 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF628Q5EBL2 1059 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 SLC16A9Q7RTY1 509 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 GDF7Q7Z4P5 450 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 OR2L13Q8N349 312 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 LIN37Q96GY3 246 aaPredicted RBP11.83□□□□□ -0.51
PTCH1-207ENST00000429896 TRIB1Q96RU8 372 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 SLC30A2Q9BRI3 323 aa11.83□□□□□ -0.51
PTCH1-207ENST00000429896 TRGV8A0A0C4DH27 118 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 MITFO75030 526 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-207ENST00000429896 NPR2P20594 1047 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 ACTA2P62736 377 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 ACTG2P63267 376 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 EIF2B1Q14232 305 aaKnown RBP11.83□□□□□ -0.52
PTCH1-207ENST00000429896 RSU1Q15404 277 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 LTC4SQ16873 150 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 LRRN1Q6UXK5 716 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 LILRA2Q8N149 483 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 SDR9C7Q8NEX9 313 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 AP1S3Q96PC3 154 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 HDHD5Q9BXW7 423 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 A0A1W2PQM1 296 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 ARL6IP5O75915 188 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 CSF2RBP32927 897 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 SLC1A3P43003 542 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 FTMTQ8N4E7 242 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF566Q969W8 418 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 ANKRD60Q9BZ19 345 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 PAQR5Q9NXK6 330 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-207ENST00000429896 HSPB11Q9Y547 144 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 TMBIM6P55061 237 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 PCBD1P61457 104 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 RHEBQ15382 184 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 AWAT2Q6E213 333 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 HAGHLQ6PII5 290 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-207ENST00000429896 NEIL3Q8TAT5 605 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 FAM210AQ96ND0 272 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 CENPBD1B2RD01 187 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 H7C417 338 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 FGF5P12034 268 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 ST8SIA1Q92185 356 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 ZBTB8AQ96BR9 441 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 S100PBPQ96BU1 408 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 SEMA4CQ9C0C4 833 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 TP63Q9H3D4 680 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-207ENST00000429896 RANBP3Q9H6Z4 567 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-207ENST00000429896 ERVK13-1Q9NX77 482 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 CHRNA9Q9UGM1 479 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 TRABD2BA6NFA1 517 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 HRGP04196 525 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 HLA-DPB1P04440 258 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 SELENBP1Q13228 472 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 PRICKLE4Q2TBC4 344 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 GLYATL2Q8WU03 294 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 C10orf90Q96M02 699 aa11.83□□□□□ -0.52
PTCH1-207ENST00000429896 TCRBV3S1A0A5B6 114 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 PRICKLE3O43900 615 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-207ENST00000429896 GDF9O60383 454 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 GCH1P30793 250 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 MEOX1P50221 254 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 MOGQ16653 247 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 HES5Q5TA89 166 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 SYNPO2LQ9H987 977 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF71Q9NQZ8 489 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-207ENST00000429896 PTHP01270 115 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms