RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 PRRG3Q9BZD7 231 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 IMPAD1Q9NX62 359 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 EMC3Q9P0I2 261 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 GRHPRQ9UBQ7 328 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 SH3BGRL2Q9UJC5 107 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 RASD1Q9Y272 281 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 ADAM18Q9Y3Q7 739 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 NOX1Q9Y5S8 564 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 TEX13CA0A0J9YWL9 993 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZAR1LA6NP61 321 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 AHRRA9YTQ3 701 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 H0YJX3 145 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 M0R129 80 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 DLGAP1O14490 977 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 XKRYO14609 159 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 PRRG2O14669 202 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 TRAF3IP2O43734 574 aaPredicted RBP7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 CYTIPO60759 359 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 WDR1O75083 606 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 PTP4A3O75365 173 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 AQP8O94778 261 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 VAMP5O95183 116 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 TGM6O95932 706 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 IFNGP01579 166 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 TP53P04637 393 aaPredicted RBP7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 HLA-DOBP13765 273 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 IFNGR1P15260 489 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF43P17038 809 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 ACVR2AP27037 513 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 GRK5P34947 590 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 PTGER4P35408 488 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 CAPGP40121 348 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 P2RY4P51582 365 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 RPS6KA3P51812 740 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 CASP6P55212 293 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 CTXN1P60606 82 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 H3F3AP84243 136 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 RASGEF1BQ0VAM2 473 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 KRR1Q13601 381 aaKnown RBP7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 MELKQ14680 651 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 PTGES3Q15185 160 aaKnown RBP7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 SF3B4Q15427 424 aaKnown RBP eCLIP7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 ACKR1Q16570 336 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC35F1Q5T1Q4 408 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 C1orf185Q5T7R7 199 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 TMEM236Q5W0B7 351 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 TTC23Q5W5X9 447 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 CASP12Q6UXS9 341 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 RPTNQ6XPR3 784 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 C3P1Q6ZMU1 363 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 DPY19L2P2Q6ZN68 376 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 HDDC2Q7Z4H3 204 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 PXKQ7Z7A4 578 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 JAZF1Q86VZ6 243 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZPLD1Q8TCW7 415 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 RASD2Q96D21 266 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 OXGR1Q96P68 337 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 ERMAPQ96PL5 475 aaPredicted RBP7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC38A2Q96QD8 506 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 TSPAN32Q96QS1 320 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 APOL4Q9BPW4 351 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 GRIP2Q9C0E4 1043 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 ENKD1Q9H0I2 346 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 Q9H521 79 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC25A19Q9HC21 320 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 FAM118AQ9NWS6 357 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 TAS2R5Q9NYW4 299 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 IL20Q9NYY1 176 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 KLHL9Q9P2J3 617 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 B3GAT1Q9P2W7 334 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 RALYQ9UKM9 306 aaKnown RBP7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 CLEC4AQ9UMR7 237 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 BAIAP2Q9UQB8 552 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 GMPPBQ9Y5P6 360 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 IER3IP1Q9Y5U9 82 aa7.06□□□□□ -1.28
HMGA1P4-201ENST00000428643 LOC100130705A0A1B0GUX0 176 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 A6NIZ1 184 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF716A6NP11 495 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 KDM4EB2RXH2 506 aaPredicted RBP7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 H0YAE9 185 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 MS4A18H0YCH9 400 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 BHLHE40O14503 412 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 GPR171O14626 319 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 AKAP8O43823 692 aaKnown RBP7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 CLIC3O95833 236 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 BCL10O95999 233 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 HMGN1P05114 100 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 TSPAN19P0C672 248 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 APEHP13798 732 aaKnown RBP7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 GABRA1P14867 456 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF3P17036 446 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 SDHAP31040 664 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 GGT2P36268 569 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 GIPRP48546 466 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 BIDP55957 195 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 PER3P56645 1201 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 CLDN17P56750 224 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 CDC42P60953 191 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 RAP1BP61224 184 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 RPL27P61353 136 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms