RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 HNRNPCL1O60812 293 aaKnown RBP14.29□□□□□ -0.12
VARS-216ENST00000428445 SLC22A3O75751 556 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 AHSA1O95433 338 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 ANP32DO95626 131 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 TACSTD2P09758 323 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 HNRNPCL4P0DMR1 293 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 ZNF43P17038 809 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 TCN1P20061 433 aaPredicted RBP14.29□□□□□ -0.12
VARS-216ENST00000428445 SRP14P37108 136 aaKnown RBP14.29□□□□□ -0.12
VARS-216ENST00000428445 CAPZA2P47755 286 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 SLC18A1P54219 525 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 AQP5P55064 265 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 LARS2Q15031 903 aaKnown RBP14.29□□□□□ -0.12
VARS-216ENST00000428445 RNF220Q5VTB9 566 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 HHATQ5VTY9 493 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 LIPNQ5VXI9 398 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 NXNQ6DKJ4 435 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 RINLQ6ZS11 566 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 COMTD1Q86VU5 262 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 FAM169BQ8N8A8 192 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 ANKRD42Q8N9B4 389 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 ZNF540Q8NDQ6 660 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 STK35Q8TDR2 534 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 UBASH3BQ8TF42 649 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 CKAP2Q8WWK9 683 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 MS4A3Q96HJ5 214 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 OXGR1Q96P68 337 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 EMC6Q9BV81 110 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 SPATA9Q9BWV2 254 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 RMND5AQ9H871 391 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 NOX3Q9HBY0 568 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 CRLF2Q9HC73 371 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 DYNLRB1Q9NP97 96 aa14.29□□□□□ -0.12
VARS-216ENST00000428445 RPL36A-HNRNPH2H7BZ11 118 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 M0R082 166 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 M0R3G1 203 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 SLC43A1O75387 559 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 HLA-HP01893 362 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 HLA-DOBP13765 273 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 IFNGR1P15260 489 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 CHN2P52757 468 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 IL1RL1Q01638 556 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 PIGFQ07326 219 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 SNTB2Q13425 540 aaKnown RBP14.28□□□□□ -0.12
VARS-216ENST00000428445 RIN1Q13671 783 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 DAG1Q14118 895 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 SLC9B1Q4ZJI4 515 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 PDCD4Q53EL6 469 aaKnown RBP14.28□□□□□ -0.12
VARS-216ENST00000428445 ZNF311Q5JNZ3 666 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 ZNF786Q8N393 782 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 GPR137CQ8N3F9 429 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.28□□□□□ -0.12
VARS-216ENST00000428445 LINC01356Q8N9X3 169 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 OR9I1Q8NGQ6 314 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 ZNF417Q8TAU3 575 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 NEU4Q8WWR8 484 aaPredicted RBP14.28□□□□□ -0.12
VARS-216ENST00000428445 ZNF587Q96SQ5 575 aaPredicted RBP14.28□□□□□ -0.12
VARS-216ENST00000428445 PARD6BQ9BYG5 372 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 NARFLQ9H6Q4 476 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 ZNF442Q9H7R0 627 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 CACYBPQ9HB71 228 aaKnown RBP14.28□□□□□ -0.12
VARS-216ENST00000428445 ZIM2Q9NZV7 527 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 FZR1Q9UM11 496 aa14.28□□□□□ -0.12
VARS-216ENST00000428445 VSTM5A8MXK1 200 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 MS4A18H0YCH9 400 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 WNT9BO14905 357 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 TCF21O43680 179 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 SNNO75324 88 aaPredicted RBP14.27□□□□□ -0.13
VARS-216ENST00000428445 RGS9O75916 674 aaPredicted RBP14.27□□□□□ -0.13
VARS-216ENST00000428445 HPRP00739 348 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 COL8A2P25067 703 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 HTR2AP28223 471 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 GTF2E2P29084 291 aaKnown RBP14.27□□□□□ -0.13
VARS-216ENST00000428445 GRPRP30550 384 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 SEC24CP53992 1094 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 WDR4P57081 412 aaKnown RBP14.27□□□□□ -0.13
VARS-216ENST00000428445 C1DQ13901 141 aaKnown RBP14.27□□□□□ -0.13
VARS-216ENST00000428445 MS4A18Q3C1V0 323 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 CEP85LQ5SZL2 805 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 LRP11Q86VZ4 500 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 ITCHQ96J02 903 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 TXNDC15Q96J42 360 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 MAELQ96JY0 434 aaKnown RBP14.27□□□□□ -0.13
VARS-216ENST00000428445 OR2M2Q96R28 347 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 MRPL37Q9BZE1 423 aaKnown RBP14.27□□□□□ -0.13
VARS-216ENST00000428445 LPAR2Q9HBW0 351 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 RAB21Q9UL25 225 aa14.27□□□□□ -0.13
VARS-216ENST00000428445 DYSFO75923 2080 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 IGKV1D-42A0A075B6H8 117 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 VENTXO95231 258 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 CD79AP11912 226 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 CDH15P55291 814 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 SH3BGRP55822 239 aaPredicted RBP14.26□□□□□ -0.13
VARS-216ENST00000428445 GLIPR1L2Q4G1C9 344 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 ELFN2Q5R3F8 820 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 C5orf46Q6UWT4 87 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 MAVSQ7Z434 540 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 TMEM123Q8N131 208 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 RFLNBQ8N5W9 214 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 MGARPQ8TDB4 240 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms