RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 TRA2AQ13595 282 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDAC9-210ENST00000428307 GGTLC2Q14390 218 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 CEACAM19Q7Z692 300 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 GALNT6Q8NCL4 622 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 ABHD4Q8TB40 342 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 HTRA1Q92743 480 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 DIRAS2Q96HU8 199 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 ARL5BQ96KC2 179 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 SDHCQ99643 169 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-210ENST00000428307 MIXL1Q9H2W2 232 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 ACOXLQ9NUZ1 547 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 PCDHGB7Q9Y5F8 929 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 B3GALT1Q9Y5Z6 326 aa9.42□□□□□ -0.9
HDAC9-210ENST00000428307 MASP2O00187 686 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 CBFA2T3O75081 653 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 NPIPB7O75200 414 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 KLF7O75840 302 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-210ENST00000428307 UMODP07911 640 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 PRKCAP17252 672 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 IL11P20809 199 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 CCKBRP32239 447 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 MC2RQ01718 297 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 ANGPT1Q15389 498 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 ZNF181Q2M3W8 571 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 SLC35D3Q5M8T2 416 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 MISPQ8IVT2 679 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 PM20D2Q8IYS1 436 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 OR8H2Q8N162 312 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 OR8K3Q8NH51 312 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 TMEM234Q8WY98 164 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 PGLYRP3Q96LB9 341 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 FOXN4Q96NZ1 517 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 KCNN2Q9H2S1 579 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 METTL7AQ9H8H3 244 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 TIGARQ9NQ88 270 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 NCDNQ9UBB6 729 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 POLHQ9Y253 713 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 SLC6A5Q9Y345 797 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 V9GYH0 126 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 LNP1A1A4G5 178 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 FUOMA2VDF0 154 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 H3BML4 177 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 OR6A2O95222 327 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 AHSA1O95433 338 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 OPN1LWP04000 364 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 F8A1P23610 371 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 TAS2R43P59537 309 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 SIRPAP78324 504 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 ACKR1Q16570 336 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 CLPPQ16740 277 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-210ENST00000428307 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.41□□□□□ -0.9
HDAC9-210ENST00000428307 ACSM3Q53FZ2 586 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 DDI2Q5TDH0 399 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 DMKNQ6E0U4 476 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-210ENST00000428307 NUP54Q7Z3B4 507 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 NR2C2APQ86WQ0 139 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 ZNF417Q8TAU3 575 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 THAP4Q8WY91 577 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 RASL10BQ96S79 203 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 ZNF587Q96SQ5 575 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-210ENST00000428307 CMKLR1Q99788 373 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 PDCD1LG2Q9BQ51 273 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 WDR54Q9H977 334 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 PPP4R1LQ9P1A2 415 aa9.41□□□□□ -0.9
HDAC9-210ENST00000428307 PMS2P1A4D2B8 440 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 FABP12A6NFH5 140 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 ANKUB1A6NFN9 424 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 PRR32B1ATL7 298 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 C9J4A7 227 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 XKRYO14609 159 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 TXNDC12O95881 172 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 MT-ATP6P00846 226 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 NAGAP17050 411 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 CENPAP49450 140 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 TMED10P49755 219 aaKnown RBP9.4□□□□□ -0.9
HDAC9-210ENST00000428307 GBX2P52951 348 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-210ENST00000428307 SLC25A1P53007 311 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 RAB15P59190 212 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 ACTA2P62736 377 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 ACTG2P63267 376 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 IL10RAQ13651 578 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 PCOLCEQ15113 449 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 ZNF79Q15937 498 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 SGCBQ16585 318 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 GLYR1Q49A26 553 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-210ENST00000428307 CDONQ4KMG0 1287 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 FAM198BQ6UWH4 519 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 FAM131AQ6UXB0 335 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-210ENST00000428307 EXD3Q8N9H8 876 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 AP3S1Q92572 193 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 TTC9Q92623 222 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 RNF32Q9H0A6 362 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 WDR76Q9H967 626 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 INIPQ9NRY2 104 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 ETAA1Q9NY74 926 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 ST6GALNAC2Q9UJ37 374 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 NXT1Q9UKK6 140 aaKnown RBP9.4□□□□□ -0.9
HDAC9-210ENST00000428307 R4GN57 208 aa9.4□□□□□ -0.9
HDAC9-210ENST00000428307 CELSR3Q9NYQ7 3312 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms