RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 BCL2L2Q92843 193 aaPredicted RBP16.06■□□□□ 0.16
PSPC1-202ENST00000427943 BOD1Q96IK1 185 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 ADAD1Q96M93 576 aaKnown RBP16.06■□□□□ 0.16
PSPC1-202ENST00000427943 MCHR1Q99705 422 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 ARHGDIGQ99819 225 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 REG4Q9BYZ8 158 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 BARX1Q9HBU1 254 aaPredicted RBP16.06■□□□□ 0.16
PSPC1-202ENST00000427943 OBP2BQ9NPH6 170 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 CPSF4LA6NMK7 179 aaKnown RBP16.05■□□□□ 0.16
PSPC1-202ENST00000427943 FBP2O00757 339 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 SEC14L2O76054 403 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 HPRP00739 348 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 HLA-DOBP13765 273 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 PCGF2P35227 344 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 NUDT6P53370 316 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 CARD17Q5XLA6 110 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 ZNF544Q6NX49 715 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 DNM1P46Q6ZS02 220 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 NET1Q7Z628 596 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-202ENST00000427943 GPR137CQ8N3F9 429 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 C10orf53Q8N6V4 93 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 ADPRHL1Q8NDY3 354 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 OR4D11Q8NGI4 311 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 OR6T1Q8NGN1 323 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 OR10A6Q8NH74 314 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 ZNF837Q96EG3 531 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-202ENST00000427943 MOGAT1Q96PD6 335 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 SLC38A2Q96QD8 506 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 OR2M2Q96R28 347 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 EPYCQ99645 322 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 ASPNQ9BXN1 380 aa16.05■□□□□ 0.16
PSPC1-202ENST00000427943 KAT8Q9H7Z6 458 aaKnown RBP16.05■□□□□ 0.16
PSPC1-202ENST00000427943 CHD3Q12873 2000 aaKnown RBP16.05■□□□□ 0.16
PSPC1-202ENST00000427943 YLPM1P49750 1951 aaKnown RBP16.05■□□□□ 0.16
PSPC1-202ENST00000427943 ARPC4-TTLL3A0A0A6YYG9 625 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 MS4A18H0YCH9 400 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 AKAP8O43823 692 aaKnown RBP16.04■□□□□ 0.16
PSPC1-202ENST00000427943 SH3BGRP55822 239 aaPredicted RBP16.04■□□□□ 0.16
PSPC1-202ENST00000427943 ARF1P84077 181 aaKnown RBP16.04■□□□□ 0.16
PSPC1-202ENST00000427943 PPP2R2BQ00005 443 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 POU3F1Q03052 451 aaPredicted RBP16.04■□□□□ 0.16
PSPC1-202ENST00000427943 CEACAM16Q2WEN9 425 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 TRMT5Q32P41 509 aaKnown RBP16.04■□□□□ 0.16
PSPC1-202ENST00000427943 MS4A18Q3C1V0 323 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 ENTPD8Q5MY95 495 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 C1QTNF12Q5T7M4 302 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 METTL21CQ5VZV1 264 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 ANKRD16Q6P6B7 361 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 RBM45Q8IUH3 476 aaKnown RBP16.04■□□□□ 0.16
PSPC1-202ENST00000427943 UEVLDQ8IX04 471 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 TMEM123Q8N131 208 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 SLC41A3Q96GZ6 507 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 KCNS3Q9BQ31 491 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 EMC6Q9BV81 110 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 EVA1AQ9H8M9 152 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 SEC61A2Q9H9S3 476 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 GPR35Q9HC97 309 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 FGFR1OP2Q9NVK5 253 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 ABCA2Q9BZC7 2435 aa16.04■□□□□ 0.16
PSPC1-202ENST00000427943 ABCA1O95477 2261 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 RPL36A-HNRNPH2H7BZ11 118 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 SERPINI2O75830 405 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 CECR9P0C854 216 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 TROVE2P10155 538 aaKnown RBP eCLIP16.03■□□□□ 0.16
PSPC1-202ENST00000427943 CD247P20963 164 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 PMS2P3Q13401 168 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 MFSD13AQ14CX5 517 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 RABL3Q5HYI8 236 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 PHYHD1Q5SRE7 291 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 SWT1Q5T5J6 900 aaKnown RBP16.03■□□□□ 0.16
PSPC1-202ENST00000427943 CGB2Q6NT52 195 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 WDR88Q6ZMY6 472 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 PATL1Q86TB9 770 aaKnown RBP16.03■□□□□ 0.16
PSPC1-202ENST00000427943 MYPOPQ86VE0 399 aaPredicted RBP16.03■□□□□ 0.16
PSPC1-202ENST00000427943 WDFY1Q8IWB7 410 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 SLC30A8Q8IWU4 369 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 PIK3C3Q8NEB9 887 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 OR6S1Q8NH40 331 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 MAGEE2Q8TD90 523 aaPredicted RBP16.03■□□□□ 0.16
PSPC1-202ENST00000427943 SLC26A7Q8TE54 656 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 TAMM41Q96BW9 452 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 TMEM43Q9BTV4 400 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 CRLF2Q9HC73 371 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 MED29Q9NX70 200 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 CORINQ9Y5Q5 1042 aa16.03■□□□□ 0.16
PSPC1-202ENST00000427943 IGHV4-30-2A0A087WSY4 118 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 H7C417 338 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 M0R3G1 203 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 CHP2O43745 196 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 FMO6PO60774 539 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 C8BP07358 591 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 CELA3BP08861 270 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 APOBEC3AP31941 199 aaPredicted RBP16.02■□□□□ 0.16
PSPC1-202ENST00000427943 GZMMP51124 257 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 CRYBA2P53672 197 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 PUDPQ08623 228 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 RAB35Q15286 201 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 VMACQ2NL98 169 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 NANOGP8Q6NSW7 305 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 ZNF613Q6PF04 617 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms