RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 BRSK1Q8TDC3 778 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 C7orf33Q8WU49 177 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 CHCHD10Q8WYQ3 142 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 PIGCQ92535 297 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 EMG1Q92979 244 aaKnown RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 CXorf40BQ96DE9 158 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 TIMD4Q96H15 378 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 CCNL2Q96S94 520 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 HIST1H4GQ99525 98 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 CCT7Q99832 543 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 SELENOIQ9C0D9 397 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 REEP4Q9H6H4 257 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 SUDS3Q9H7L9 328 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 SLC25A22Q9H936 323 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 FOLH1BQ9HBA9 442 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 POLE4Q9NR33 117 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 SMOXQ9NWM0 555 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 THUMPD1Q9NXG2 353 aaKnown RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 ANAPC11Q9NYG5 84 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 RPS6KB2Q9UBS0 482 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 CDH9Q9ULB4 789 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 ASF1AQ9Y294 204 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF142P52746 1687 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 AK9Q5TCS8 1911 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 SLIT1O75093 1534 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 LTN1O94822 1766 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 RPAP1Q9BWH6 1393 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 PLEKHG1Q9ULL1 1385 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 PEAK1Q9H792 1746 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 SH3TC1Q8TE82 1336 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 MAPK8IP3Q9UPT6 1336 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 PIK3C2AO00443 1686 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 PTCH1Q13635 1447 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 SSH2Q76I76 1423 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 ADAMTS13Q76LX8 1427 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 IGHV1OR21-1A0A087WYE8 117 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 A0A0G2JRQ6 117 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 TCRBV9S1A1TA0A576 114 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 USP27XA6NNY8 438 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 A8MUA0 341 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 GOLGA8SH3BPF8 625 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 LGI1O95970 557 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF853P0CG23 659 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 POU2F1P14859 743 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 NCK1P16333 377 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 ABOP16442 354 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 CXCR2P25025 360 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 HTR1EP28566 365 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 PRDX3P30048 256 aaKnown RBP1.68□□□□□ -2.14
PTPRC-208ENST00000427110 CCR1P32246 355 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 GRIA1P42261 906 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 SSR1P43307 286 aaKnown RBP1.68□□□□□ -2.14
PTPRC-208ENST00000427110 MAGEA8P43361 318 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 VDAC2P45880 294 aaPredicted RBP1.68□□□□□ -2.14
PTPRC-208ENST00000427110 GSSP48637 474 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 CASP4P49662 377 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 KPNA2P52292 529 aaKnown RBP1.68□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF133P52736 654 aaPredicted RBP1.68□□□□□ -2.14
PTPRC-208ENST00000427110 ATP1B3P54709 279 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 AIF1P55008 147 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 ACTR1AP61163 376 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 OXA1LQ15070 435 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 PARP15Q460N3 678 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 BCL7AQ4VC05 210 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 MARCH8Q5T0T0 291 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 PDZK1Q5T2W1 519 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 SLC26A11Q86WA9 606 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 RDH10Q8IZV5 341 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 C20orf203Q8NBC4 194 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 MFSD9Q8NBP5 474 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 OR9G1Q8NH87 305 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 NEIL3Q8TAT5 605 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 FBXO30Q8TB52 745 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 UFD1Q92890 307 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 UBE2E3Q969T4 207 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 ELSPBP1Q96BH3 223 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 RPUSD4Q96CM3 377 aaKnown RBP1.68□□□□□ -2.14
PTPRC-208ENST00000427110 CMTM7Q96FZ5 175 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 TCEANC2Q96MN5 208 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 SLC38A2Q96QD8 506 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 COPS8Q99627 209 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 CRACR2AQ9BSW2 395 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 TMEM43Q9BTV4 400 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 ACTR6Q9GZN1 396 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 ROGDIQ9GZN7 287 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 RNF167Q9H6Y7 350 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 HOXC10Q9NYD6 342 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 KCNIP1Q9NZI2 227 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 NYAP2Q9P242 653 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 SEC14L3Q9UDX4 400 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 MTRF1LQ9UGC7 380 aaKnown RBP1.68□□□□□ -2.14
PTPRC-208ENST00000427110 KIF25Q9UIL4 384 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 POLDIP2Q9Y2S7 368 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 LRRC37A3O60309 1634 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 KIF24Q5T7B8 1368 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 PIK3R4Q99570 1358 aa1.68□□□□□ -2.14
PTPRC-208ENST00000427110 LMO7Q8WWI1 1683 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 FAM208AQ9UK61 1670 aaKnown RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 SIPA1L3O60292 1781 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 RGPD2P0DJD1 1756 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms