RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ST6GAL1P15907 406 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 AGERQ15109 404 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 PEA15Q15121 130 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 ZNF750Q32MQ0 723 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 SLC30A6Q6NXT4 461 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 LAS2Q8IYD9 372 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 OR4K5Q8NGD3 323 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 LURAP1Q96LR2 239 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 GAREM1Q9H706 876 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 CYSLTR2Q9NS75 346 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 AKAP7Q9P0M2 348 aaPredicted RBP14.69□□□□□ -0.06
PKP4-205ENST00000426248 CHST2Q9Y4C5 530 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 CCL27Q9Y4X3 112 aa14.69□□□□□ -0.06
PKP4-205ENST00000426248 LDB3O75112 727 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 DMWDQ09019 674 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 FAM122BQ7Z309 247 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 OAFQ86UD1 273 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 ACOT11Q8WXI4 607 aaPredicted RBP14.68□□□□□ -0.06
PKP4-205ENST00000426248 RFKQ969G6 155 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 BTNL2Q9UIR0 455 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 ST8SIA5O15466 376 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 PRODHO43272 600 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 FADS1O60427 444 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 PTBP1P26599 531 aaKnown RBP eCLIP14.68□□□□□ -0.069e-7■■■■■ 35.5
PKP4-205ENST00000426248 ILKQ13418 452 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 TPBGQ13641 420 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 HEPHL1Q6MZM0 1159 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 ZNF546Q86UE3 836 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 OR4K14Q8NGD5 310 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 OR9A4Q8NGU2 314 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 C14orf79Q96F83 325 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 SLC25A19Q9HC21 320 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 AK6Q9Y3D8 172 aaKnown RBP14.68□□□□□ -0.06
PKP4-205ENST00000426248 ATG4BQ9Y4P1 393 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 CKAP5Q14008 2032 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 M0R3H8 397 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 GATCO43716 136 aaKnown RBP14.68□□□□□ -0.06
PKP4-205ENST00000426248 TMPRSS11DO60235 418 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 SEMA7AO75326 666 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 SMIM6P0DI80 62 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 ACP2P11117 423 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 STARD6P59095 220 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 ERV3-1Q14264 604 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 C6orf120Q7Z4R8 191 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 STK35Q8TDR2 534 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 NDC1Q9BTX1 674 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 BHLHE41Q9C0J9 482 aaPredicted RBP14.68□□□□□ -0.06
PKP4-205ENST00000426248 ACSS1Q9NUB1 689 aaPredicted RBP14.68□□□□□ -0.06
PKP4-205ENST00000426248 EIF1BO60739 113 aaKnown RBP14.68□□□□□ -0.06
PKP4-205ENST00000426248 GPR37L1O60883 481 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 SNAPINO95295 136 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 NQO2P16083 231 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 EIF1P41567 113 aaKnown RBP14.68□□□□□ -0.06
PKP4-205ENST00000426248 XCR1P46094 333 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 SMIM11AP58511 58 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 RAB40BQ12829 278 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 ALKBH1Q13686 389 aaKnown RBP14.68□□□□□ -0.06
PKP4-205ENST00000426248 HYAL4Q2M3T9 481 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 FAM180AQ6UWF9 173 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 NRROSQ86YC3 692 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 LDLRAD3Q86YD5 345 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 OR4C15Q8NGM1 316 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 RXFP4Q8TDU9 374 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 HSD17B8Q92506 261 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 OR1F2PQ96R84 312 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 NEUROD4Q9HD90 331 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 ZFP57Q9NU63 452 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 KLHL28Q9NXS3 571 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 CNIH4Q9P003 139 aa14.68□□□□□ -0.06
PKP4-205ENST00000426248 OBSL1O75147 1896 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 C1orf226A1L170 272 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 GFERP55789 205 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 SLC25A35Q3KQZ1 300 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 LIN54Q6MZP7 749 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 STOML3Q8TAV4 291 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 RSRP1Q9BUV0 290 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 MYNNQ9NPC7 610 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 DCAF16Q9NXF7 216 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 FAAHO00519 579 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 PRAF2O60831 178 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 OR12D1P0DN82 309 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 PTHLHP12272 177 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 NR0B1P51843 470 aaKnown RBP14.67□□□□□ -0.06
PKP4-205ENST00000426248 LIMK1P53667 647 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 DLX5P56178 289 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 PLXDC1Q8IUK5 500 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 OR5P2Q8WZ92 322 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 ZNF607Q96SK3 696 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 DOPEY2Q9Y3R5 2298 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 GIPP09681 153 aaPredicted RBP14.67□□□□□ -0.06
PKP4-205ENST00000426248 TFPIP10646 304 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 TAS2R41P59536 307 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 ZNF155Q12901 538 aaPredicted RBP14.67□□□□□ -0.06
PKP4-205ENST00000426248 ZNHIT3Q15649 155 aaPredicted RBP14.67□□□□□ -0.06
PKP4-205ENST00000426248 HLA-DQA1Q5Y7H0 255 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 AMER3Q8N944 861 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 CADM4Q8NFZ8 388 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 OR8S1Q8NH09 359 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 GLYATL2Q8WU03 294 aa14.67□□□□□ -0.06
PKP4-205ENST00000426248 DDX31Q9H8H2 851 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms