RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 PDE7BQ9NP56 450 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 SERTAD3Q9UJW9 196 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 ZNF346Q9UL40 294 aaKnown RBP9.74□□□□□ -0.85
CUX1-205ENST00000425244 COPS3Q9UNS2 423 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 MAU2Q9Y6X3 613 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 HEATR5AQ86XA9 2040 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 RALGAPA1Q6GYQ0 2036 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 OR6C68A6NDL8 312 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 TLCD2A6NGC4 264 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 SERPINA3P01011 423 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 OR2T7P0C7T2 308 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 CT45A8P0DMV1 189 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 CT45A9P0DMV2 189 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 HPGDP15428 266 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 AHCYP23526 432 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 SLC6A1P30531 599 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 ACTA2P62736 377 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 ACTG2P63267 376 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 DGCR2P98153 550 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 ZNF141Q15928 474 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 BTBD16Q32M84 506 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 CT45A2Q5DJT8 189 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 PYHIN1Q6K0P9 492 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 OR2T27Q8NH04 317 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 MOSPD2Q8NHP6 518 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 DUSP23Q9BVJ7 150 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 SLC25A18Q9H1K4 315 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 NCDNQ9UBB6 729 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 ELOA3DA6NLF2 546 aaPredicted RBP9.73□□□□□ -0.85
CUX1-205ENST00000425244 A8MUA0 341 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 AKR7A2O43488 359 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 SC5DO75845 299 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 SPI1P17947 270 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 CD1CP29017 333 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 ERP29P30040 261 aaKnown RBP9.73□□□□□ -0.85
CUX1-205ENST00000425244 MAGEB1P43366 347 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 PRTGQ2VWP7 1150 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 ELOA3BQ3SY89 546 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 YIF1BQ5BJH7 314 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 TMPRSS9Q7Z410 1059 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 PLXDC1Q8IUK5 500 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 ZNF433Q8N7K0 673 aaPredicted RBP9.73□□□□□ -0.85
CUX1-205ENST00000425244 POMGNT2Q8NAT1 580 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 ELOA3Q8NG57 546 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 HOXB13Q92826 284 aaPredicted RBP9.73□□□□□ -0.85
CUX1-205ENST00000425244 TCTN2Q96GX1 697 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 A0A087WUJ7 227 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 A0A0A6YYJ9 748 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 TEX13CA0A0J9YWL9 993 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 ACOD1A6NK06 481 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 ARHGEF9O43307 516 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 ARL6IP5O75915 188 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 RPP14O95059 124 aaKnown RBP9.73□□□□□ -0.85
CUX1-205ENST00000425244 EPXP11678 715 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 AQP2P41181 271 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 GPR3P46089 330 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 GZMKP49863 264 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 DIO1P49895 249 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 C19orf57Q0VDD7 668 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 MAB21L1Q13394 359 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 NR0B2Q15466 257 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 BICRALQ6AI39 1079 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 LEG1Q6P5S2 330 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 LINC00114Q6XXX2 140 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 DPY19L2P2Q6ZN68 376 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 TOMM5Q8N4H5 51 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 ARHGEF39Q8N4T4 335 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 PHOSPHO1Q8TCT1 267 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 C3orf49Q96BT1 292 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 TSSK2Q96PF2 358 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 DERL3Q96Q80 235 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 SPRTNQ9H040 489 aaPredicted RBP9.73□□□□□ -0.85
CUX1-205ENST00000425244 SLA2Q9H6Q3 261 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 HSPB11Q9Y547 144 aa9.73□□□□□ -0.85
CUX1-205ENST00000425244 EFCAB7A8K855 629 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 TMEM150CB9EJG8 249 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 NPIPB9F8W1W9 429 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 OIP5O43482 229 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 CER1O95813 267 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 GIFP27352 417 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 SKP1P63208 163 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 FCN2Q15485 313 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 HSD17B12Q53GQ0 312 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 PLA1AQ53H76 456 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 HES5Q5TA89 166 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 FAM205BPQ63HN1 556 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 PRSS45Q7RTY3 260 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 SIAH3Q8IW03 269 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 ZNF595Q8IYB9 648 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 ZNF511Q8NB15 262 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 NPEPL1Q8NDH3 523 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 CEP76Q8TAP6 659 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 LGALS14Q8TCE9 139 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 ZFAND1Q8TCF1 268 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 RELTQ969Z4 430 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 Q96M85 177 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 MED28Q9H204 178 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 UCK1Q9HA47 277 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 NOX4Q9NPH5 578 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 PNO1Q9NRX1 252 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms