RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZSWIM7Q19AV6 140 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 LCN1P1Q5VSP4 162 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 TIGD4Q8IY51 512 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 UBQLNLQ8IYU4 475 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 EID2Q8N6I1 236 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 STT3BQ8TCJ2 826 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 NSMAFQ92636 917 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 TMCO6Q96DC7 493 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 LCORQ96JN0 433 aaPredicted RBP10.84□□□□□ -0.67
PTPRN-204ENST00000423636 NECAB3Q96P71 396 aaPredicted RBP10.84□□□□□ -0.67
PTPRN-204ENST00000423636 ABCG5Q9H222 651 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 ZMAT3Q9HA38 289 aaKnown RBP10.84□□□□□ -0.67
PTPRN-204ENST00000423636 ZNF221Q9UK13 617 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 FLVCR2Q9UPI3 526 aa10.84□□□□□ -0.67
PTPRN-204ENST00000423636 RPH3AQ9Y2J0 694 aaPredicted RBP10.84□□□□□ -0.67
PTPRN-204ENST00000423636 NPIPB9F8W1W9 429 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 ZNHIT1O43257 154 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 LYRM1O43325 122 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 OR7A10O76100 309 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 PRKCAP17252 672 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 KLK2P20151 261 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 HSD17B7P56937 341 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 SIRPAP78324 504 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 SKP2Q13309 424 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 YOD1Q5VVQ6 348 aaPredicted RBP10.83□□□□□ -0.68
PTPRN-204ENST00000423636 PWWP2BQ6NUJ5 590 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 XKRXQ6PP77 449 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 LGALS14Q8TCE9 139 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 ADAMTS18Q8TE60 1221 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 AP3S1Q92572 193 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 PHF21AQ96BD5 680 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 MS4A3Q96HJ5 214 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 GTPBP2Q9BX10 602 aaKnown RBP10.83□□□□□ -0.68
PTPRN-204ENST00000423636 SLC22A4Q9H015 551 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 ALG5Q9Y673 324 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 AKR7A2O43488 359 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 RAB3BP20337 219 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 MAP2K3P46734 347 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 QPRTQ15274 297 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF74Q16587 644 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 MESTQ5EB52 335 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 LIPNQ5VXI9 398 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 ARHGAP11AQ6P4F7 1023 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 OR6F1Q8NGZ6 308 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 TSPAN32Q96QS1 320 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 THAP7Q9BT49 309 aaPredicted RBP10.83□□□□□ -0.68
PTPRN-204ENST00000423636 PPP1R3EQ9H7J1 279 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 TRPV5Q9NQA5 729 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 PIN1P1O15428 100 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 SLC16A7O60669 478 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 FZD7O75084 574 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 SLC25A12O75746 678 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 TOXO94900 526 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 HIST1H2ABP04908 130 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 SPARCP09486 303 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 FGF9P31371 208 aaPredicted RBP10.83□□□□□ -0.68
PTPRN-204ENST00000423636 DDOSTP39656 456 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 CXCL12P48061 93 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 IFITM2Q01629 132 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 EBPQ15125 230 aaKnown RBP10.83□□□□□ -0.68
PTPRN-204ENST00000423636 ZFP69Q49AA0 526 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 CARD17Q5XLA6 110 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 FCRLAQ7L513 359 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 HIST3H2AQ7L7L0 130 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 HIST1H2ACQ93077 130 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 CCDC32Q9BV29 185 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 HOXD1Q9GZZ0 328 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 MMP25Q9NPA2 562 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 NUDT15Q9NV35 164 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 MCUBQ9NWR8 336 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 TMEM5Q9Y2B1 443 aa10.83□□□□□ -0.68
PTPRN-204ENST00000423636 DNAJC13O75165 2243 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 GIMD1P0DJR0 217 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 EVI2BP34910 448 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 GPR143P51810 404 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 AFF3P51826 1226 aaKnown RBP10.82□□□□□ -0.68
PTPRN-204ENST00000423636 GBX2P52951 348 aaPredicted RBP10.82□□□□□ -0.68
PTPRN-204ENST00000423636 CDC20Q12834 499 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF141Q15928 474 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 EXOSC6Q5RKV6 272 aaKnown RBP10.82□□□□□ -0.68
PTPRN-204ENST00000423636 OR7E24Q6IFN5 339 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 ZCCHC12Q6PEW1 402 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 CD200R1LQ6Q8B3 271 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 FRMD6Q96NE9 622 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.82□□□□□ -0.68
PTPRN-204ENST00000423636 ST6GALNAC2Q9UJ37 374 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 SERTAD3Q9UJW9 196 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF337Q9Y3M9 751 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 A3GALT2U3KPV4 340 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 DUX1O43812 170 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 IDH3BO43837 385 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 ANKRD34CP0C6C1 535 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 GIFP27352 417 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 PPP3R1P63098 170 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 CCL7P80098 99 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 GPLD1P80108 840 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 MANEAQ5SRI9 462 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 LINGO2Q7L985 606 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 LSMEM1Q8N8F7 131 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 ST6GAL2Q96JF0 529 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms