RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 B3GAT1Q9P2W7 334 aa19.22■□□□□ 0.67
TRAF4-204ENST00000422344 SLC7A7Q9UM01 511 aa19.22■□□□□ 0.67
TRAF4-204ENST00000422344 USP22Q9UPT9 525 aa19.22■□□□□ 0.67
TRAF4-204ENST00000422344 LAMP3Q9UQV4 416 aa19.22■□□□□ 0.67
TRAF4-204ENST00000422344 ZANQ9Y493 2812 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 FAM171A2A8MVW0 826 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 DSCAMO60469 2012 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 WNT11O96014 354 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 MT-ATP6P00846 226 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 BGLAPP02818 100 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 CDH11P55287 796 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 RPS4XP62701 263 aaKnown RBP19.21■□□□□ 0.67
TRAF4-204ENST00000422344 LGALS3BPQ08380 585 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 LRRC23Q53EV4 343 aaPredicted RBP19.21■□□□□ 0.67
TRAF4-204ENST00000422344 CARM1Q86X55 608 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 DEPDC4Q8N2C3 294 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 WDR31Q8NA23 367 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 LILRB1Q8NHL6 650 aaPredicted RBP19.21■□□□□ 0.67
TRAF4-204ENST00000422344 NEUROG1Q92886 237 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 MPP4Q96JB8 637 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 C1QTNF6Q9BXI9 259 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 LINC00470Q9BZP3 86 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 POU2F3Q9UKI9 436 aa19.21■□□□□ 0.67
TRAF4-204ENST00000422344 PRR14LQ5THK1 2151 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 LOC102725191A0A1B0GVB3 256 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 UPK3AO75631 287 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 PTH2RP49190 550 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 CRYBA2P53672 197 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 SLC22A25Q6T423 547 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 MICU2Q8IYU8 434 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 CIARTQ8N365 385 aaPredicted RBP19.2■□□□□ 0.66
TRAF4-204ENST00000422344 GPR137CQ8N3F9 429 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 SMAP2Q8WU79 429 aaPredicted RBP19.2■□□□□ 0.66
TRAF4-204ENST00000422344 SLC41A3Q96GZ6 507 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 MOGAT1Q96PD6 335 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 GSX2Q9BZM3 304 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 PCDHAC1Q9H158 963 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 EFCAB1Q9HAE3 211 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 FAIMQ9NVQ4 179 aa19.2■□□□□ 0.66
TRAF4-204ENST00000422344 MRPL39Q9NYK5 338 aaKnown RBP19.2■□□□□ 0.66
TRAF4-204ENST00000422344 CISD1Q9NZ45 108 aaKnown RBP19.2■□□□□ 0.66
TRAF4-204ENST00000422344 ELOVL7A1L3X0 281 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 KPNA4O00629 521 aaPredicted RBP19.19■□□□□ 0.66
TRAF4-204ENST00000422344 OR6A2O95222 327 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 AHCYP23526 432 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 CD40P25942 277 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 SEC24CP53992 1094 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 TAS2R41P59536 307 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 UBE2NP61088 152 aaKnown RBP19.19■□□□□ 0.66
TRAF4-204ENST00000422344 ROR2Q01974 943 aaKnown RBP19.19■□□□□ 0.66
TRAF4-204ENST00000422344 POU3F1Q03052 451 aaPredicted RBP19.19■□□□□ 0.66
TRAF4-204ENST00000422344 PUDPQ08623 228 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 HIKESHIQ53FT3 197 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 CYBRD1Q53TN4 286 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 LINC00114Q6XXX2 140 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 DEF8Q6ZN54 512 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 YTHDF3Q7Z739 585 aaKnown RBP19.19■□□□□ 0.66
TRAF4-204ENST00000422344 PRIMA1Q86XR5 153 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 PIK3C3Q8NEB9 887 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 OR1K1Q8NGR3 316 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 GTPBP3Q969Y2 492 aaKnown RBP19.19■□□□□ 0.66
TRAF4-204ENST00000422344 COX4I2Q96KJ9 171 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 OBP2BQ9NPH6 170 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 NOX1Q9Y5S8 564 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 CSPG4Q6UVK1 2322 aa19.19■□□□□ 0.66
TRAF4-204ENST00000422344 SHISA9B4DS77 424 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 LRRN3E7EW58 273 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 MS4A18H0YCH9 400 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 H7C1Q1 480 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 TRAF3IP2O43734 574 aaPredicted RBP19.18■□□□□ 0.66
TRAF4-204ENST00000422344 ZNF432O94892 652 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 HPRP00739 348 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 TNFRSF1BP20333 461 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 KDELR2P33947 212 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 SH3BGRP55822 239 aaPredicted RBP19.18■□□□□ 0.66
TRAF4-204ENST00000422344 MS4A18Q3C1V0 323 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 TBRG1Q3YBR2 411 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 PRSS57Q6UWY2 283 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 WDR88Q6ZMY6 472 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 CPLX4Q7Z7G2 160 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 OR5J2Q8NH18 312 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 IGFBPL1Q8WX77 278 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 TPD52L3Q96J77 140 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 OR2M2Q96R28 347 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 HOPXQ9BPY8 73 aaPredicted RBP19.18■□□□□ 0.66
TRAF4-204ENST00000422344 SLC19A3Q9BZV2 496 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 ALG2Q9H553 416 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 CMTM6Q9NX76 183 aa19.18■□□□□ 0.66
TRAF4-204ENST00000422344 HIVEP2P31629 2446 aa19.17■□□□□ 0.66
TRAF4-204ENST00000422344 ROS1P08922 2347 aa19.17■□□□□ 0.66
TRAF4-204ENST00000422344 KIAA1324LA8MWY0 1029 aaPredicted RBP19.17■□□□□ 0.66
TRAF4-204ENST00000422344 SMAD7O15105 426 aaKnown RBP19.17■□□□□ 0.66
TRAF4-204ENST00000422344 GSTA4O15217 222 aa19.17■□□□□ 0.66
TRAF4-204ENST00000422344 SERPINI2O75830 405 aa19.17■□□□□ 0.66
TRAF4-204ENST00000422344 LYPD3O95274 346 aa19.17■□□□□ 0.66
TRAF4-204ENST00000422344 CH25HO95992 272 aa19.17■□□□□ 0.66
TRAF4-204ENST00000422344 THY1P04216 161 aa19.17■□□□□ 0.66
TRAF4-204ENST00000422344 HIST1H2ABP04908 130 aa19.17■□□□□ 0.66
TRAF4-204ENST00000422344 ADORA3P0DMS8 318 aa19.17■□□□□ 0.66
TRAF4-204ENST00000422344 PCSK6P29122 969 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms