RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 MED18Q9BUE0 208 aa7.62□□□□□ -1.19
USP54-203ENST00000418501 WDR76Q9H967 626 aa7.62□□□□□ -1.19
USP54-203ENST00000418501 RPRD1BQ9NQG5 326 aaKnown RBP7.62□□□□□ -1.19
USP54-203ENST00000418501 IL20RAQ9UHF4 553 aa7.62□□□□□ -1.19
USP54-203ENST00000418501 GNG8Q9UK08 70 aa7.62□□□□□ -1.19
USP54-203ENST00000418501 B3GNT3Q9Y2A9 372 aa7.62□□□□□ -1.19
USP54-203ENST00000418501 A0A1W2PQ72 361 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 TMEM72A0PK05 275 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 METTL15A6NJ78 407 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 SNPHO15079 494 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 SULT1C4O75897 302 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 ATE1O95260 518 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 DLGAP3O95886 979 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 BGLAPP02818 100 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 HIST1H1CP16403 213 aaKnown RBP7.61□□□□□ -1.19
USP54-203ENST00000418501 SPI1P17947 270 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 CD40LGP29965 261 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 CASP3P42574 277 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 SNRPNP63162 240 aaKnown RBP7.61□□□□□ -1.19
USP54-203ENST00000418501 GGTLC2Q14390 218 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 SLC25A53Q5H9E4 307 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 CBLN3Q6UW01 205 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 BAIAP2L2Q6UXY1 529 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 PXKQ7Z7A4 578 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 OR6N2Q8NGY6 317 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 PPP1R14BQ96C90 147 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 KCTD12Q96CX2 325 aaKnown RBP7.61□□□□□ -1.19
USP54-203ENST00000418501 THOC3Q96J01 351 aaKnown RBP7.61□□□□□ -1.19
USP54-203ENST00000418501 SFXN2Q96NB2 322 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 GPA33Q99795 319 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 NIPAL2Q9H841 368 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 STMN3Q9NZ72 180 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 HS3ST3B1Q9Y662 390 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 SOCS6O14544 535 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 ASAH2BP0C7U1 165 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 ZNF24P17028 368 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 SRD5A2P31213 254 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 PPP3R1P63098 170 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 EGR3Q06889 387 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 TRIM16LQ309B1 348 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 FAM199XQ6PEV8 388 aaPredicted RBP7.61□□□□□ -1.19
USP54-203ENST00000418501 ARL9Q6T311 187 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 DHRS13Q6UX07 377 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 CYB561A3Q8NBI2 242 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 OXGR1Q96P68 337 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 EXO5Q9H790 373 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 CD1AP06126 327 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 PTNP21246 168 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 LIPAP38571 399 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 RIDAP52758 137 aaKnown RBP7.61□□□□□ -1.19
USP54-203ENST00000418501 TOMM34Q15785 309 aaPredicted RBP7.61□□□□□ -1.19
USP54-203ENST00000418501 LAIR2Q6ISS4 152 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 LUZP2Q86TE4 346 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 GTPBP8Q8N3Z3 284 aaPredicted RBP7.61□□□□□ -1.19
USP54-203ENST00000418501 SLC38A9Q8NBW4 561 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 OR4F15Q8NGB8 312 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 SIGLEC11Q96RL6 698 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 TBX5Q99593 518 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 FAM173AQ9BQD7 235 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 PRRG4Q9BZD6 226 aa7.61□□□□□ -1.19
USP54-203ENST00000418501 SRA1Q9HD15 236 aaKnown RBP7.61□□□□□ -1.19
USP54-203ENST00000418501 ISPDA4D126 451 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 FAM183AA6NL82 134 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 ZNF254O75437 659 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 TRAPPC6AO75865 159 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 THY1P04216 161 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 PYCR1P32322 319 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 SOX18P35713 384 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 RPS4XP62701 263 aaKnown RBP7.6□□□□□ -1.19
USP54-203ENST00000418501 FAM189A2Q15884 450 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 ACER2Q5QJU3 275 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 SLC35D2Q76EJ3 337 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 OR10G3Q8NGC4 313 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 OR6N1Q8NGY5 312 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 PAQR8Q8TEZ7 354 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 NSMAFQ92636 917 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 TAAR8Q969N4 342 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 ZMYND19Q96E35 227 aaPredicted RBP7.6□□□□□ -1.19
USP54-203ENST00000418501 NMNAT3Q96T66 252 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 CEP192Q8TEP8 1941 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 OR6C65A6NJZ3 312 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 M0R082 166 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 CNR1P21554 472 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 ETV5P41161 510 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 ETV1P50549 477 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 GABREP78334 506 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 FOXF1Q12946 379 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 THEM4Q5T1C6 240 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 TIGD3Q6B0B8 471 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 ADGRG3Q86Y34 549 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 PHC2Q8IXK0 858 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 OR2M3Q8NG83 312 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 NEIL3Q8TAT5 605 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 ZNF417Q8TAU3 575 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 KTI12Q96EK9 354 aaPredicted RBP7.6□□□□□ -1.19
USP54-203ENST00000418501 Q96M85 177 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 OPALINQ96PE5 141 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 OR5M11Q96RB7 305 aa7.6□□□□□ -1.19
USP54-203ENST00000418501 ZNF587Q96SQ5 575 aaPredicted RBP7.6□□□□□ -1.19
USP54-203ENST00000418501 WDR77Q9BQA1 342 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms