RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 TEX47Q8TBZ9 253 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 OSTF1Q92882 214 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 KISS1RQ969F8 398 aaPredicted RBP6.12□□□□□ -1.43
CPS1-202ENST00000417946 ZNF566Q969W8 418 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 TSPAN32Q96QS1 320 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 TAPBPLQ9BX59 468 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 HCAR1Q9BXC0 346 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 POLDIP3Q9BY77 421 aaKnown RBP6.12□□□□□ -1.43
CPS1-202ENST00000417946 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.12□□□□□ -1.43
CPS1-202ENST00000417946 ADNPQ9H2P0 1102 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 PRORYQ9H606 182 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 ACKR4Q9NPB9 350 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 HINT3Q9NQE9 182 aaKnown RBP6.12□□□□□ -1.43
CPS1-202ENST00000417946 NANSQ9NR45 359 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 PNPLA3Q9NST1 481 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 FKBP14Q9NWM8 211 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 QPCTLQ9NXS2 382 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 ALKBH4Q9NXW9 302 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 MRPL39Q9NYK5 338 aaKnown RBP6.12□□□□□ -1.43
CPS1-202ENST00000417946 SPRR3Q9UBC9 169 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 ENOPH1Q9UHY7 261 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 ING1Q9UK53 422 aaPredicted RBP6.12□□□□□ -1.43
CPS1-202ENST00000417946 TP53TG5Q9Y2B4 290 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 ORC6Q9Y5N6 252 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 HSPE1-MOB4S4R3N1 261 aa6.12□□□□□ -1.43
CPS1-202ENST00000417946 FREM1Q5H8C1 2179 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 SHANK1Q9Y566 2161 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 GTF3C1Q12789 2109 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 MED12LQ86YW9 2145 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 ATMQ13315 3056 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 A0A1W2PNV4 684 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 CCDC182A6NF36 153 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 AQP7P3A6NL99 342 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 TRIM64CA6NLI5 447 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 KDM4EB2RXH2 506 aaPredicted RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 FAM47E-STBD1D6RA91 191 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 KLRC4-KLRK1H3BQV0 150 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 SLC1A7O00341 560 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 SMAD9O15198 467 aaKnown RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 OR2T1O43869 369 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 XPNPEP2O43895 674 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 ENTPD6O75354 484 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 AKR7A3O95154 331 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 NDUFB2O95178 105 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 RCBTB2O95199 551 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 PMS2P2O95744 297 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 IGHMP01871 453 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 LYNP07948 512 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 CD14P08571 375 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 FAM87AP0C7U9 286 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 APEHP13798 732 aaKnown RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 ZNF708P17019 499 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 BMP7P18075 431 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 SLC2A5P22732 501 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 NOS3P29474 1203 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 FMO3P31513 532 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 SLC6A6P31641 620 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 SLC15A1P46059 708 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 PCYT1AP49585 367 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 CLK1P49759 484 aaKnown RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 DIO1P49895 249 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 RPS6KA3P51812 740 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 AGFG1P52594 562 aaKnown RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 CHN2P52757 468 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 PPIAP62937 165 aaKnown RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 ERVK-25P63136 954 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 CXADRP78310 365 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 RUNX1T1Q06455 604 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 ZP4Q12836 540 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 ZNF169Q14929 603 aaPredicted RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 PLEKHN1Q494U1 663 aaPredicted RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 ANKDD1AQ495B1 522 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 MESTQ5EB52 335 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 C6orf141Q5SZD1 244 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 ARMC4Q5T2S8 1044 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 VASNQ6EMK4 673 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 ABLIM2Q6H8Q1 611 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 RPL13AP3Q6NVV1 102 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 PCSK4Q6UW60 755 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 DPY19L2P2Q6ZN68 376 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 C20orf204Q6ZNR8 217 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 TMPPEQ6ZT21 453 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 ASB18Q6ZVZ8 466 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 PTCHD4Q6ZW05 846 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 MAMDC2Q7Z304 686 aaPredicted RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 NANOGNBQ7Z5D8 188 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 CDK20Q8IZL9 346 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 SLC43A2Q8N370 569 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 FAM26EQ8N5C1 309 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 TMEM99Q8N816 258 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 TCEANCQ8N8B7 351 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 LSM14AQ8ND56 463 aaKnown RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 OR2T33Q8NG76 320 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 TMEM163Q8TC26 289 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 ZNRF4Q8WWF5 429 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 HDAC2Q92769 488 aaKnown RBP6.11□□□□□ -1.43
CPS1-202ENST00000417946 SLC25A36Q96CQ1 311 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 DDIT4LQ96D03 193 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 RASD2Q96D21 266 aa6.11□□□□□ -1.43
CPS1-202ENST00000417946 NMD3Q96D46 503 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms