RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 OXGR1Q96P68 337 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 PTDSS2Q9BVG9 487 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 TPT1P8Q9HAU6 139 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 LPAR2Q9HBW0 351 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 NOX3Q9HBY0 568 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 RCE1Q9Y256 329 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 CMAHPQ9Y471 501 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 GPR45Q9Y5Y3 372 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 DSPPQ9NZW4 1301 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 ZNF503-AS2A6NEH8 195 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 FTCDNL1E5RQL4 147 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 M0R082 166 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 AKAP8O43823 692 aaKnown RBP16.7■□□□□ 0.26
UBXN4-202ENST00000415164 NPIPB7O75200 414 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 SLC22A3O75751 556 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 IL6P05231 212 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 TACSTD2P09758 323 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 CDH15P55291 814 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 ZSWIM7Q19AV6 140 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 HHATQ5VTY9 493 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.7■□□□□ 0.26
UBXN4-202ENST00000415164 FAM169BQ8N8A8 192 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 GLB1L3Q8NCI6 653 aaPredicted RBP16.7■□□□□ 0.26
UBXN4-202ENST00000415164 PIK3C3Q8NEB9 887 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 ZNF417Q8TAU3 575 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 ZNF587Q96SQ5 575 aaPredicted RBP16.7■□□□□ 0.26
UBXN4-202ENST00000415164 RMND5AQ9H871 391 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 HAO1Q9UJM8 370 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 USP22Q9UPT9 525 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 IFT52Q9Y366 437 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 NOX1Q9Y5S8 564 aa16.7■□□□□ 0.26
UBXN4-202ENST00000415164 A0A0G2JPF8 293 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 TMEM129A0AVI4 362 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 HNRNPCL2B2RXH8 293 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 HNRNPCL3B7ZW38 293 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 AIM2O14862 343 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 HNRNPCL1O60812 293 aaKnown RBP16.69■□□□□ 0.26
UBXN4-202ENST00000415164 RGS9O75916 674 aaPredicted RBP16.69■□□□□ 0.26
UBXN4-202ENST00000415164 HNRNPCL4P0DMR1 293 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 NQO1P15559 274 aaKnown RBP16.69■□□□□ 0.26
UBXN4-202ENST00000415164 GRPRP30550 384 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 MVDP53602 400 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 PIGFQ07326 219 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 SYT3Q9BQG1 590 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 METTL17Q9H7H0 456 aaPredicted RBP16.69■□□□□ 0.26
UBXN4-202ENST00000415164 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.69■□□□□ 0.26
UBXN4-202ENST00000415164 METRNQ9UJH8 293 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 CHST2Q9Y4C5 530 aa16.69■□□□□ 0.26
UBXN4-202ENST00000415164 V9GYY5 206 aaPredicted RBP16.69■□□□□ 0.26
UBXN4-202ENST00000415164 TRPC5OSA6NMA1 111 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 C5orf58C9J3I9 102 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 RPL36A-HNRNPH2H7BZ11 118 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 HLA-HP01893 362 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 NUDT7P0C024 238 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 EGR4Q05215 589 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 MPP2Q14168 576 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 GKAP1Q5VSY0 366 aaPredicted RBP16.68■□□□□ 0.26
UBXN4-202ENST00000415164 GLCCI1Q86VQ1 547 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 UEVLDQ8IX04 471 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 MGARPQ8TDB4 240 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 SLC38A4Q969I6 547 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 MAL2Q969L2 176 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 TAAR8Q969N4 342 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 VPS33AQ96AX1 596 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 MS4A3Q96HJ5 214 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 ITCHQ96J02 903 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 OR2M2Q96R28 347 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 EMC6Q9BV81 110 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 TMEM109Q9BVC6 243 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 MRPL37Q9BZE1 423 aaKnown RBP16.68■□□□□ 0.26
UBXN4-202ENST00000415164 SSU72Q9NP77 194 aaKnown RBP16.68■□□□□ 0.26
UBXN4-202ENST00000415164 B3GAT1Q9P2W7 334 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 FZR1Q9UM11 496 aa16.68■□□□□ 0.26
UBXN4-202ENST00000415164 ZNF99A8MXY4 864 aaPredicted RBP16.67■□□□□ 0.26
UBXN4-202ENST00000415164 HDAC3O15379 428 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 SERPINI2O75830 405 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 ZNF432O94892 652 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 IDO1P14902 403 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 PCMT1P22061 227 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 GPR6P46095 362 aaPredicted RBP16.67■□□□□ 0.26
UBXN4-202ENST00000415164 RUNX1T1Q06455 604 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 RIN1Q13671 783 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 PDCD4Q53EL6 469 aaKnown RBP16.67■□□□□ 0.26
UBXN4-202ENST00000415164 PHYHD1Q5SRE7 291 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 CEP85LQ5SZL2 805 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 FAM69AQ5T7M9 428 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 THSD4Q6ZMP0 1018 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 REV1Q9UBZ9 1251 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 PRDM4Q9UKN5 801 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 POFUT2Q9Y2G5 429 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 SPEF1Q9Y4P9 236 aa16.67■□□□□ 0.26
UBXN4-202ENST00000415164 M0R233 179 aa16.66■□□□□ 0.26
UBXN4-202ENST00000415164 SYNGR3O43761 229 aa16.66■□□□□ 0.26
UBXN4-202ENST00000415164 OR2T1O43869 369 aa16.66■□□□□ 0.26
UBXN4-202ENST00000415164 ALDH3B1P43353 468 aa16.66■□□□□ 0.26
UBXN4-202ENST00000415164 PTDSS1P48651 473 aaKnown RBP16.66■□□□□ 0.26
UBXN4-202ENST00000415164 DVL1P1P54792 670 aaPredicted RBP16.66■□□□□ 0.26
UBXN4-202ENST00000415164 AQP5P55064 265 aa16.66■□□□□ 0.26
UBXN4-202ENST00000415164 NCALDP61601 193 aa16.66■□□□□ 0.26
UBXN4-202ENST00000415164 GALK2Q01415 458 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms