RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ARRDC1-AS1Q9H2J1 176 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 B3GAT1Q9P2W7 334 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 ATXN7L1Q9ULK2 861 aaPredicted RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 UBE2J1Q9Y385 318 aaPredicted RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 H7C1Q1 480 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 GABRPO00591 440 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 AMY2AP04746 511 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 NPR2P20594 1047 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 CRMP1Q14194 572 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 RBM39Q14498 530 aaKnown RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 DUSP7Q16829 419 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 COL28A1Q2UY09 1125 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 UBE2NLQ5JXB2 153 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 CNEP1R1Q8N9A8 125 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 CSNK2A3Q8NEV1 391 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 OR11L1Q8NGX0 322 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 CASTOR1Q8WTX7 329 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF385DQ9H6B1 395 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 PLEKHJ1Q9NW61 149 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 NEU3Q9UQ49 428 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 MAB21L2Q9Y586 359 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 SNX11Q9Y5W9 270 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 PMF1-BGLAPU3KQ54 211 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 ANKRD12Q6UB98 2062 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 TRAPPC2LH3BP13 241 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 MSL3P1P0C860 447 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 SELEP16581 610 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 EVI2BP34910 448 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 MPLP40238 635 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 KIR2DL1P43626 348 aaPredicted RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 JMJD6Q6NYC1 403 aaPredicted RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 OR4F15Q8NGB8 312 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 KCNG3Q8TAE7 436 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 DNAJA3Q96EY1 480 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 MYOTQ9UBF9 498 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 SMIM30A4D0T7 59 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 FAM183AA6NL82 134 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 KDM4EB2RXH2 506 aaPredicted RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF736B4DX44 427 aaPredicted RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 H3BSH0 61 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 GLSO94925 669 aaPredicted RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 RAB3DO95716 219 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 TAS2R46P59540 309 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 TAS2R19P59542 299 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 RPS23P62266 143 aaKnown RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 CD83Q01151 205 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 IHHQ14623 411 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF620Q6ZNG0 422 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 SLC46A3Q7Z3Q1 461 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 CALHM3Q86XJ0 350 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 NLGN4YQ8NFZ3 816 aaPredicted RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 OR13F1Q8NGS4 319 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 RRNAD1Q96FB5 475 aaKnown RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 DUSP15Q9H1R2 295 aaPredicted RBP11□□□□□ -0.65
PTPRF-205ENST00000414879 OR51E2Q9H255 320 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 SEMA4GQ9NTN9 838 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 KCNS2Q9ULS6 477 aa11□□□□□ -0.65
PTPRF-205ENST00000414879 IGHV1OR21-1A0A087WYE8 117 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 M0R233 179 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 RP2O75695 350 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 NKX2-2O95096 273 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 S100A9P06702 114 aaKnown RBP10.99□□□□□ -0.65
PTPRF-205ENST00000414879 BDKRB2P30411 391 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 CARTPTQ16568 116 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 THEM4Q5T1C6 240 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 OR5M10Q6IEU7 315 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 PIAS4Q8N2W9 510 aaPredicted RBP10.99□□□□□ -0.65
PTPRF-205ENST00000414879 TMEM151AQ8N4L1 468 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 OR1N1Q8NGS0 311 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 ZFAND1Q8TCF1 268 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 PHB2Q99623 299 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 CDX2Q99626 313 aaPredicted RBP10.99□□□□□ -0.65
PTPRF-205ENST00000414879 APMAPQ9HDC9 416 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 USP22Q9UPT9 525 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 AK6Q9Y3D8 172 aaKnown RBP10.99□□□□□ -0.65
PTPRF-205ENST00000414879 DCDC2BA2VCK2 349 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 PRAMEF27A3QJZ7 478 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 FXYD1O00168 92 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 SULT1B1O43704 296 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 MOSPD3O75425 235 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 CBR3O75828 277 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 C21orf33P30042 268 aaPredicted RBP10.99□□□□□ -0.65
PTPRF-205ENST00000414879 SDHAP31040 664 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF750Q32MQ0 723 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 OR7E24Q6IFN5 339 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 PRICKLE2Q7Z3G6 844 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 RIMKLAQ8IXN7 391 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 SYS1Q8N2H4 156 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 OR2L13Q8N349 312 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 ANKRD53Q8N9V6 530 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 SCGB1C1Q8TD33 95 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 APH1AQ96BI3 265 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 CNRIP1Q96F85 164 aaPredicted RBP10.99□□□□□ -0.65
PTPRF-205ENST00000414879 DMRTB1Q96MA1 342 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 TTC3P53804 2025 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 TRAV6A0A075B6T7 132 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 A0A087WUU8 490 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 IFNA5P01569 189 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 ALKBH1Q13686 389 aaKnown RBP10.99□□□□□ -0.65
PTPRF-205ENST00000414879 GRK1Q15835 563 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms