RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 ASPNQ9BXN1 380 aa23.02■■□□□ 1.28
VEGFA-207ENST00000413642 LINC00470Q9BZP3 86 aa23.02■■□□□ 1.28
VEGFA-207ENST00000413642 GID8Q9NWU2 228 aa23.02■■□□□ 1.28
VEGFA-207ENST00000413642 SLC7A7Q9UM01 511 aa23.02■■□□□ 1.28
VEGFA-207ENST00000413642 RCE1Q9Y256 329 aa23.02■■□□□ 1.28
VEGFA-207ENST00000413642 SH3GLB1Q9Y371 365 aa23.02■■□□□ 1.28
VEGFA-207ENST00000413642 A0A096LPE4 126 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 A0A1W2PPZ6 126 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 H7C1Q1 480 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 SHOX2O60902 331 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-207ENST00000413642 TUBA1BP68363 451 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 TUBA4AP68366 448 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 PHYHD1Q5SRE7 291 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 CARD17Q5XLA6 110 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 NHLRC1Q6VVB1 395 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 TUBA1AQ71U36 451 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 ABHD12BQ7Z5M8 362 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-207ENST00000413642 CARM1Q86X55 608 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 UEVLDQ8IX04 471 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 ADPRHL1Q8NDY3 354 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 ZNF837Q96EG3 531 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-207ENST00000413642 OR2M2Q96R28 347 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 CMTM6Q9NX76 183 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 CORINQ9Y5Q5 1042 aa23.01■■□□□ 1.27
VEGFA-207ENST00000413642 MTORP42345 2549 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 LOC102725191A0A1B0GVB3 256 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 TRAPPC13A5PLN9 417 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 SLC43A1O75387 559 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 INHBBP09529 407 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 ARF1P84077 181 aaKnown RBP23■■□□□ 1.27
VEGFA-207ENST00000413642 MFSD13AQ14CX5 517 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 HMBOX1Q6NT76 420 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 Q71RC1 249 aaPredicted RBP23■■□□□ 1.27
VEGFA-207ENST00000413642 TMEM123Q8N131 208 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 GTPBP3Q969Y2 492 aaKnown RBP23■■□□□ 1.27
VEGFA-207ENST00000413642 TRAF4Q9BUZ4 470 aaPredicted RBP23■■□□□ 1.27
VEGFA-207ENST00000413642 NELFAQ9H3P2 528 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 MED29Q9NX70 200 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 MRPL39Q9NYK5 338 aaKnown RBP23■■□□□ 1.27
VEGFA-207ENST00000413642 POU2F3Q9UKI9 436 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 MGAT4BQ9UQ53 548 aa23■■□□□ 1.27
VEGFA-207ENST00000413642 OR6C65A6NJZ3 312 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 KPNA4O00629 521 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-207ENST00000413642 PLPP3O14495 311 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 SMAD7O15105 426 aaKnown RBP22.99■■□□□ 1.27
VEGFA-207ENST00000413642 SLC22A2O15244 555 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 NDUFS7O75251 213 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 SERPINI2O75830 405 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 CH25HO95992 272 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 COX4I1P13073 169 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 SEC24CP53992 1094 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 POU3F1Q03052 451 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-207ENST00000413642 VEZF1Q14119 521 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 ERICH5Q6P6B1 374 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 KLHL24Q6TFL4 600 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 TREML1Q86YW5 311 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 SCAIQ8N9R8 606 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 RP9Q8TA86 221 aaKnown RBP22.99■■□□□ 1.27
VEGFA-207ENST00000413642 PROX1Q92786 737 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 BOD1Q96IK1 185 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 PRSS27Q9BQR3 290 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 PCDHAC1Q9H158 963 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 GPR35Q9HC97 309 aa22.99■■□□□ 1.27
VEGFA-207ENST00000413642 CADP27708 2225 aa22.98■■□□□ 1.27
VEGFA-207ENST00000413642 FAM220BPB1ANY3 271 aa22.98■■□□□ 1.27
VEGFA-207ENST00000413642 ATP8B1O43520 1251 aa22.98■■□□□ 1.27
VEGFA-207ENST00000413642 TMCC2O75069 709 aa22.98■■□□□ 1.27
VEGFA-207ENST00000413642 AHCYP23526 432 aa22.98■■□□□ 1.27
VEGFA-207ENST00000413642 OR1E2P47887 323 aa22.98■■□□□ 1.27
VEGFA-207ENST00000413642 TTC33Q6PID6 262 aaPredicted RBP22.98■■□□□ 1.27
VEGFA-207ENST00000413642 GPR137CQ8N3F9 429 aa22.98■■□□□ 1.27
VEGFA-207ENST00000413642 LRRC17Q8N6Y2 441 aa22.98■■□□□ 1.27
VEGFA-207ENST00000413642 RASSF5Q8WWW0 418 aa22.98■■□□□ 1.27
VEGFA-207ENST00000413642 RADILQ96JH8 1075 aa22.98■■□□□ 1.27
VEGFA-207ENST00000413642 ELAC2Q9BQ52 826 aaKnown RBP22.98■■□□□ 1.27
VEGFA-207ENST00000413642 ZNF469Q96JG9 3925 aaPredicted RBP22.98■■□□□ 1.27
VEGFA-207ENST00000413642 USF3Q68DE3 2245 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 ATP6V1G2-DDX39BF2Z307 99 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 M0R3G1 203 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 SEC14L2O76054 403 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 WNT11O96014 354 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 PUDPQ08623 228 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 ZNF74Q16587 644 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 CEACAM16Q2WEN9 425 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 LRRC23Q53EV4 343 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-207ENST00000413642 CYBRD1Q53TN4 286 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 DEF8Q6ZN54 512 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 DTX2Q86UW9 622 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 SLC15A3Q8IY34 581 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 MICU2Q8IYU8 434 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 OR2T12Q8NG77 320 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 COX4I2Q96KJ9 171 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 CRLF2Q9HC73 371 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 BAG5Q9UL15 447 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 ATP23Q9Y6H3 246 aa22.97■■□□□ 1.27
VEGFA-207ENST00000413642 SLC35F4A4IF30 521 aa22.96■■□□□ 1.27
VEGFA-207ENST00000413642 C11orf98E9PRG8 122 aa22.96■■□□□ 1.27
VEGFA-207ENST00000413642 RPL36A-HNRNPH2H7BZ11 118 aa22.96■■□□□ 1.27
VEGFA-207ENST00000413642 CCDC22O60826 627 aa22.96■■□□□ 1.27
VEGFA-207ENST00000413642 MT-ATP6P00846 226 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms