RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 TMEM44Q2T9K0 475 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 NPSR1Q6W5P4 371 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 HSDL2Q6YN16 418 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 OR4N2Q8NGD1 307 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 RNASE11Q8TAA1 199 aaKnown RBP11.92□□□□□ -0.5
LITAF-203ENST00000413364 BRIX1Q8TDN6 353 aaKnown RBP11.92□□□□□ -0.5
LITAF-203ENST00000413364 NARS2Q96I59 477 aaKnown RBP11.92□□□□□ -0.5
LITAF-203ENST00000413364 TMEM184BQ9Y519 407 aaPredicted RBP11.92□□□□□ -0.5
LITAF-203ENST00000413364 TRIOBPQ9H2D6 2365 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 OR2W5A6NFC9 320 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 LGALS8O00214 317 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 RAD1O60671 282 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 NMBP08949 121 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 PTNP21246 168 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 DNASE1P24855 282 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 GALNSP34059 522 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 C1DQ13901 141 aaKnown RBP11.91□□□□□ -0.5
LITAF-203ENST00000413364 SERTAD2Q14140 314 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 CCDC157Q569K6 752 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 DDI2Q5TDH0 399 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 NLRC3Q7RTR2 1065 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 CARFQ8N187 725 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 WDSUB1Q8N9V3 476 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 OR2T33Q8NG76 320 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 RNFT2Q96EX2 444 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 SAMD8Q96LT4 415 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 CNPPD1Q9BV87 410 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 RNF32Q9H0A6 362 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 TMEM27Q9HBJ8 222 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 Q9N2J8 555 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.91□□□□□ -0.5
LITAF-203ENST00000413364 MED11Q9P086 117 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 THADAQ6YHU6 1953 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 NPIPB9F8W1W9 429 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 K7ESF4 209 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 STK25O00506 426 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 BCAT2O15382 392 aaPredicted RBP11.91□□□□□ -0.5
LITAF-203ENST00000413364 CH25HO95992 272 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 PVALBP20472 110 aaPredicted RBP11.91□□□□□ -0.5
LITAF-203ENST00000413364 MAKP20794 623 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 SSTR2P30874 369 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 RPS19P39019 145 aaKnown RBP11.91□□□□□ -0.5
LITAF-203ENST00000413364 CD96P40200 585 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 ETV5P41161 510 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 SOX3P41225 446 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 MTNR1AP48039 350 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 CXCL12P48061 93 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 INPP1P49441 399 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 AFF3P51826 1226 aaKnown RBP11.91□□□□□ -0.5
LITAF-203ENST00000413364 OR1D5P58170 312 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 ERVK-25P63136 954 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 MLLT11Q13015 90 aaPredicted RBP11.91□□□□□ -0.5
LITAF-203ENST00000413364 SSPNQ14714 243 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 ZNF141Q15928 474 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 ZSWIM7Q19AV6 140 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 AADACL4Q5VUY2 407 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 PAQR6Q6TCH4 344 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 METAP1DQ6UB28 335 aaPredicted RBP11.91□□□□□ -0.5
LITAF-203ENST00000413364 LNX2Q8N448 690 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 RCBTB1Q8NDN9 531 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 PFN4Q8NHR9 129 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 RFKQ969G6 155 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 PFDN5Q99471 154 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 G6PC3Q9BUM1 346 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 DPH1Q9BZG8 443 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 UBQLN3Q9H347 655 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 ENAMQ9NRM1 1142 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 SIDT1Q9NXL6 827 aaKnown RBP11.91□□□□□ -0.5
LITAF-203ENST00000413364 DNAJB12Q9NXW2 375 aaKnown RBP11.91□□□□□ -0.5
LITAF-203ENST00000413364 SCP2D1Q9UJQ7 156 aa11.91□□□□□ -0.5
LITAF-203ENST00000413364 IGHV1OR21-1A0A087WYE8 117 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 C7orf66A4D0T2 115 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 D6RAR5 112 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 H3BMH7 237 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 GPR37O15354 613 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 SLC31A2O15432 143 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 NUDT21O43809 227 aaKnown RBP11.9□□□□□ -0.5
LITAF-203ENST00000413364 ZGLP1P0C6A0 271 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 CT45A8P0DMV1 189 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 CT45A9P0DMV2 189 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 DEFA5Q01523 94 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 BIKQ13323 160 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 SNTB1Q13884 538 aaKnown RBP11.9□□□□□ -0.5
LITAF-203ENST00000413364 AMZ1Q400G9 498 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 CT45A2Q5DJT8 189 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 ZNF614Q8N883 585 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 ZNF615Q8N8J6 731 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 C16orf52Q8NHV5 167 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 BARHL1Q9BZE3 327 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 DUSP15Q9H1R2 295 aaPredicted RBP11.9□□□□□ -0.5
LITAF-203ENST00000413364 OR10A5Q9H207 317 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 FN3KQ9H479 309 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 SEBOXQ9HB31 216 aaPredicted RBP11.9□□□□□ -0.5
LITAF-203ENST00000413364 CUTCQ9NTM9 273 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 C20orf141Q9NUB4 165 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 FLRT3Q9NZU0 649 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 FBXL2Q9UKC9 423 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 MED31Q9Y3C7 131 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 ABCA7Q8IZY2 2146 aa11.9□□□□□ -0.5
LITAF-203ENST00000413364 SPAG17Q6Q759 2223 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms