RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SRMSQ9H3Y6 488 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 RXFP3Q9NSD7 469 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 A0A1B0GW55 424 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 CYR61O00622 381 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 CTSVO60911 334 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF432O94892 652 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 CT62P0C5K7 136 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 DUX4L2P0CJ85 424 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 DUX4L3P0CJ86 424 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 DUX4L4P0CJ87 422 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 DUX4L5P0CJ88 424 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 DUX4L6P0CJ89 424 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 DUX4L7P0CJ90 424 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF35P13682 527 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 RPA2P15927 270 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 ITPKBP27987 946 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 IGFALSP35858 605 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 LTBQ06643 244 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 ALKBH1Q13686 389 aaKnown RBP16.1■□□□□ 0.17
SDCBP-202ENST00000413219 KIRREL2Q6UWL6 708 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 SLC16A9Q7RTY1 509 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 OR6K3Q8NGY3 331 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 OR5AK2Q8NH90 309 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 APOOQ9BUR5 198 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 LMAN2LQ9H0V9 348 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 DUX4Q9UBX2 424 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF337Q9Y3M9 751 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 RWDD3Q9Y3V2 267 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 PTPRSQ13332 1948 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 FXYD6-FXYD2A0A087WZ82 144 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 D6RAR5 112 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 MAGEB1P43366 347 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 SLC25A1P53007 311 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 MAZP56270 477 aaKnown RBP16.1■□□□□ 0.17
SDCBP-202ENST00000413219 PCGF3Q3KNV8 242 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF660Q6AZW8 331 aaPredicted RBP16.1■□□□□ 0.17
SDCBP-202ENST00000413219 VITQ6UXI7 678 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 KRT77Q7Z794 578 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 OR4C16Q8NGL9 310 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 RSC1A1Q92681 617 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 PAWRQ96IZ0 340 aaKnown RBP16.1■□□□□ 0.17
SDCBP-202ENST00000413219 OR2M4Q96R27 311 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 LMF2Q9BU23 707 aaKnown RBP16.1■□□□□ 0.17
SDCBP-202ENST00000413219 ALG12Q9BV10 488 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 FXYD6Q9H0Q3 95 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 TSPAN10Q9H1Z9 355 aaPredicted RBP16.1■□□□□ 0.17
SDCBP-202ENST00000413219 PILRAQ9UKJ1 303 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 SCN3AQ9NY46 2000 aa16.1■□□□□ 0.17
SDCBP-202ENST00000413219 A0A087WUJ7 227 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 A0A1W2PP55 124 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF860A6NHJ4 632 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 PRR32B1ATL7 298 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 UPK3AO75631 287 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 CBX7O95931 251 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 ACRP10323 421 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 CSRP1P21291 193 aaKnown RBP16.09■□□□□ 0.17
SDCBP-202ENST00000413219 CFPP27918 469 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 PRPS1P60891 318 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 RPS4XP62701 263 aaKnown RBP16.09■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF141Q15928 474 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 FAM78AQ5JUQ0 283 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 CFAP77Q6ZQR2 320 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF227Q86WZ6 799 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF595Q8IYB9 648 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 TMEM52Q8NDY8 209 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 ZPLD1Q8TCW7 415 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 ZDHHC1Q8WTX9 485 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 TRPV4Q9HBA0 871 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 EXOSC3Q9NQT5 275 aaKnown RBP16.09■□□□□ 0.17
SDCBP-202ENST00000413219 TBC1D29Q9UFV1 150 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 MOKQ9UQ07 419 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 COL4A2P08572 1712 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 TBC1D3IA0A087WXS9 549 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 TRBV5-7A0A0A0MS05 114 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 POM121CA8CG34 1229 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 EFCAB7A8K855 629 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 SDC3O75056 442 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 HPP00738 406 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
SDCBP-202ENST00000413219 C2orf68Q2NKX9 166 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 FCRL6Q6DN72 434 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 OR7E24Q6IFN5 339 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 FIGLAQ6QHK4 219 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 TSSK4Q6SA08 328 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 TMPRSS12Q86WS5 348 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF454Q8N9F8 522 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF417Q8TAU3 575 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 ALX4Q9H161 411 aaPredicted RBP16.09■□□□□ 0.17
SDCBP-202ENST00000413219 SLC25A32Q9H2D1 315 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 STEAP1Q9UHE8 339 aa16.09■□□□□ 0.17
SDCBP-202ENST00000413219 LGALS8O00214 317 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 GOSR2O14653 212 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 SIX6O95475 246 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 PROS1P07225 676 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 ANXA2P07355 339 aaKnown RBP16.08■□□□□ 0.16
SDCBP-202ENST00000413219 ITGB8P26012 769 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 SSBP1Q04837 148 aaKnown RBP16.08■□□□□ 0.16
SDCBP-202ENST00000413219 ANKRD16Q6P6B7 361 aa16.08■□□□□ 0.16
SDCBP-202ENST00000413219 MUC20Q8N307 709 aaPredicted RBP16.08■□□□□ 0.16
SDCBP-202ENST00000413219 OR52R1Q8NGF1 315 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms