RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 DUSP7Q16829 419 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 LEG1Q6P5S2 330 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 CALHM3Q86XJ0 350 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 SPARTQ8N0X7 666 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 LNX2Q8N448 690 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 CHDHQ8NE62 594 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 OR51G2Q8NGK0 314 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 OR4K13Q8NH42 304 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 ADIPOR1Q96A54 375 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 LRFN5Q96NI6 719 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 TTYH2Q9BSA4 534 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 IKZF5Q9H5V7 419 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 APMAPQ9HDC9 416 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 SNTG1Q9NSN8 517 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 RLIMQ9NVW2 624 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 GPR83Q9NYM4 423 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 MED11Q9P086 117 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 NUP210Q8TEM1 1887 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 A0A1W2PRQ8 180 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 NUDT19A8MXV4 375 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 IFNA6P05013 189 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 CEACAM1P13688 526 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 CSRP1P21291 193 aaKnown RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 ACVR1BP36896 505 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 AP2S1P53680 142 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 ZNF181Q2M3W8 571 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 COL28A1Q2UY09 1125 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 HSD17B12Q53GQ0 312 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 RHOUQ7L0Q8 258 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 PIAS4Q8N2W9 510 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 OR14K1Q8NGZ2 314 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 C7orf50Q9BRJ6 194 aaKnown RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 SLC22A4Q9H015 551 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 GMPR2Q9P2T1 348 aaKnown RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 GPR55Q9Y2T6 319 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-211ENST00000413186 EYSQ5T1H1 3165 aa7.82□□□□□ -1.16
SYNE1-211ENST00000413186 TCRBV16S1A1N1A0A5B0 115 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 OR2W5A6NFC9 320 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 EIF1AYO14602 144 aaKnown RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 PRKYO43930 277 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 PPP1R3DO95685 299 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 CYB5AP00167 134 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 GSTT2BP0CG30 244 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ZNF182P17025 639 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 JUNBP17275 347 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 GNALP38405 381 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 OMPP47874 163 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 FOXK1P85037 733 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 SHFQ7M4L6 423 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 GDF7Q7Z4P5 450 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ZBTB46Q86UZ6 589 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ANKRD13BQ86YJ7 626 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ACBD7Q8N6N7 88 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ANKRD9Q96BM1 317 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 GPER1Q99527 375 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 SLC30A2Q9BRI3 323 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 MENTQ9BUN1 341 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 MROQ9BYG7 248 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 GPATCH2Q9NW75 528 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 PAK1IP1Q9NWT1 392 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 SLC2A8Q9NY64 477 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 IER3IP1Q9Y5U9 82 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 CEPT1Q9Y6K0 416 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ANKRD36A6QL64 1941 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 G3V3Y1 287 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 LINC01387J3KSC0 135 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 DLGAP1O14490 977 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 HTR1AP08908 422 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 UCNP55089 124 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 SELENOVP59797 346 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ACTA2P62736 377 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ACTG2P63267 376 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 FAM69AQ5T7M9 428 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 COX15Q7KZN9 410 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 OR8K3Q8NH51 312 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 CNN2Q99439 309 aaKnown RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 SLC19A3Q9BZV2 496 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 AMBRA1Q9C0C7 1298 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 GABARAPL1Q9H0R8 117 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 SLC38A1Q9H2H9 487 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 PAQR5Q9NXK6 330 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ENPP5Q9UJA9 477 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 CAMK2AQ9UQM7 478 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 AK6Q9Y3D8 172 aaKnown RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 KLK4Q9Y5K2 254 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 WIF1Q9Y5W5 379 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ORC5O43913 435 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 KIAA0513O60268 411 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ICOSLGO75144 302 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 CBR3O75828 277 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 IFI6P09912 130 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 TBXA2RP21731 343 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ADARB1P78563 741 aaKnown RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 SELENBP1Q13228 472 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 E2F2Q14209 437 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 GRAMD2AQ8IUY3 354 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 SLC35B4Q969S0 331 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 DNAJA3Q96EY1 480 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 MED17Q9NVC6 651 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ANKRD10Q9NXR5 420 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms