RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 MAGEE2Q8TD90 523 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 BCL2L2Q92843 193 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 LRRC58Q96CX6 371 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 CCDC134Q9H6E4 229 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 FKRPQ9H9S5 495 aa17.15■□□□□ 0.34
TSPAN4-209ENST00000409543 HEATR1Q9H583 2144 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 BBIP1A8MTZ0 92 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 MS4A18H0YCH9 400 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 AKAP8O43823 692 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 HOXB1P14653 301 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 NQO1P15559 274 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 SH3BGRP55822 239 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 ROR2Q01974 943 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 MAPRE2Q15555 327 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 NPTX1Q15818 432 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 CLEC12BQ2HXU8 276 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 MS4A18Q3C1V0 323 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 MMEL1Q495T6 779 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 RABL3Q5HYI8 236 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 ANKRD16Q6P6B7 361 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 B3GLCTQ6Y288 498 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 Q71RC1 249 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 CALHM3Q86XJ0 350 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 SLC26A7Q8TE54 656 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 RASSF5Q8WWW0 418 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 TAMM41Q96BW9 452 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 ASPNQ9BXN1 380 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 MRPL39Q9NYK5 338 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 ZANQ9Y493 2812 aa17.14■□□□□ 0.33
TSPAN4-209ENST00000409543 ARPC4-TTLL3A0A0A6YYG9 625 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 FXYD1O00168 92 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 MRASO14807 208 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 TRAF3IP2O43734 574 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 CHP2O43745 196 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 HPRP00739 348 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 PTNP21246 168 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 FABP6P51161 128 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 UBE2NP61088 152 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 IL1RL1Q01638 556 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 GUCY1A3Q02108 690 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 PMS2P3Q13401 168 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 TNK1Q13470 666 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 ENTPD8Q5MY95 495 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 C11orf71Q6IPW1 123 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 ZNF544Q6NX49 715 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 UEVLDQ8IX04 471 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 FBXL14Q8N1E6 418 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 PIK3C3Q8NEB9 887 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 OR4D11Q8NGI4 311 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 MOGAT1Q96PD6 335 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 OR2M2Q96R28 347 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 ECSITQ9BQ95 431 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 BARX1Q9HBU1 254 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 CBLN4Q9NTU7 201 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 ATP23Q9Y6H3 246 aa17.13■□□□□ 0.33
TSPAN4-209ENST00000409543 CPSF4LA6NMK7 179 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 LYPD3O95274 346 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 MT-ATP6P00846 226 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 IGHV4-39P01824 125 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 CRYBA2P53672 197 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 SF3A3Q12874 501 aaKnown RBP eCLIP17.12■□□□□ 0.333e-13■■■■■ 49.7
TSPAN4-209ENST00000409543 HSP90B2PQ58FF3 399 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 REP15Q6BDI9 236 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 RBM45Q8IUH3 476 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 TMEM123Q8N131 208 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 MUC15Q8N387 334 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 GPR137CQ8N3F9 429 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 C10orf53Q8N6V4 93 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 VANGL1Q8TAA9 524 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 ADAMTS16Q8TE57 1224 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 PCDHAC1Q9H158 963 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 GPR35Q9HC97 309 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 MOV10Q9HCE1 1003 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 NOX1Q9Y5S8 564 aa17.12■□□□□ 0.33
TSPAN4-209ENST00000409543 A0A096LPE4 126 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 IGHV1-18A0A0C4DH31 117 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 LOC100653049A0A140TA62 436 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 A0A1W2PPZ6 126 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 TRAPPC13A5PLN9 417 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 LRRN3E7EW58 273 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 PLPP3O14495 311 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 NDUFS7O75251 213 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 KRT34O76011 436 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 THY1P04216 161 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 HLA-DOBP13765 273 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 ARF1P84077 181 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 PUDPQ08623 228 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 VEZF1Q14119 521 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 C3orf36Q3SXR2 165 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 NHLRC1Q6VVB1 395 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 WDR88Q6ZMY6 472 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 SNX32Q86XE0 403 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 FAM169BQ8N8A8 192 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 PCYOX1LQ8NBM8 494 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 ADAD1Q96M93 576 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 HS6ST2Q96MM7 605 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 SLC38A2Q96QD8 506 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 NELFAQ9H3P2 528 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 CRLF2Q9HC73 371 aa17.11■□□□□ 0.33
TSPAN4-209ENST00000409543 MED4Q9NPJ6 270 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms