RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SBK2P0C263 348 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 OR2T7P0C7T2 308 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 CT45A8P0DMV1 189 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 CT45A9P0DMV2 189 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 APEHP13798 732 aaKnown RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 FUT1P19526 365 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 GBX2P52951 348 aaPredicted RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC16A1P53985 500 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 MRPL28Q13084 256 aaKnown RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 PON3Q15166 354 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 ELOA3BQ3SY89 546 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 KLHL26Q53HC5 615 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 PRR30Q53SZ7 412 aaPredicted RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 CT45A2Q5DJT8 189 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC35F1Q5T1Q4 408 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 MZT2BQ6NZ67 158 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 DGAT2L6Q6ZPD8 337 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 OVCH1Q7RTY7 1134 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 KLBQ86Z14 1044 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 TMEM151BQ8IW70 566 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 CADM3Q8N126 398 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 SYS1Q8N2H4 156 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 FAM98AQ8NCA5 519 aaKnown RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 TNRC6AQ8NDV7 1962 aaKnown RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 FAM83FQ8NEG4 500 aaPredicted RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 ELOA3Q8NG57 546 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 OR10H4Q8NGA5 316 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 OR2T27Q8NH04 317 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 OR51A7Q8NH64 312 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 OR5W2Q8NH69 310 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 OR14A16Q8NHC5 309 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 CT55Q8WUE5 264 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 PHYHIPQ92561 330 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 DAZLQ92904 295 aaKnown RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 LCORQ96JN0 433 aaPredicted RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 ERMAPQ96PL5 475 aaPredicted RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 TNFRSF13CQ96RJ3 184 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 KATNB1Q9BVA0 655 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 MFRPQ9BY79 579 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC22A4Q9H015 551 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 OR51V1Q9H2C8 321 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 ABCB9Q9NP78 766 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 MEPEQ9NQ76 525 aaPredicted RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC22A11Q9NSA0 550 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 C20orf141Q9NUB4 165 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 CLCA3PQ9Y6N3 262 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 PRRC2CQ9Y520 2896 aaKnown RBP11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 ITPR3Q14573 2671 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 C2orf92A0A1B0GVN3 265 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 PLPP2O43688 288 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 APOL3O95236 402 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC2A10O95528 541 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 PPP1R3DO95685 299 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 IGKV1D-16P01601 117 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 UBL4AP11441 157 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 RPL4P36578 427 aaKnown RBP11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 CCL11P51671 97 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 RPS15P62841 145 aaKnown RBP11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 BTG2P78543 158 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 MAT1AQ00266 395 aaKnown RBP11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 ELAVL1Q15717 326 aaKnown RBP11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 EMC4Q5J8M3 183 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF544Q6NX49 715 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 FAM198BQ6UWH4 519 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 CCBE1Q6UXH8 406 aaPredicted RBP11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 NPSR1Q6W5P4 371 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 COX15Q7KZN9 410 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 SHFQ7M4L6 423 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 AKAP14Q86UN6 197 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 RAB43Q86YS6 212 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 ARIH2OSQ8N7S6 290 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 C19orf18Q8NEA5 215 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 BBS1Q8NFJ9 593 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 DOK4Q8TEW6 326 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 LIPHQ8WWY8 451 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 SMPDL3BQ92485 455 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 HTRA1Q92743 480 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 PTP4A1Q93096 173 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 EFHD2Q96C19 240 aaPredicted RBP11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 SENP5Q96HI0 755 aaPredicted RBP11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF649Q9BS31 505 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 TMED9Q9BVK6 235 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 SRRQ9GZT4 340 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 LAT2Q9GZY6 243 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 QPCTLQ9NXS2 382 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 COPS7AQ9UBW8 275 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 ERRFI1Q9UJM3 462 aaPredicted RBP11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 MOKQ9UQ07 419 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 FARSAQ9Y285 508 aaKnown RBP11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 FER1L5A0AVI2 2057 aa11.72□□□□□ -0.53
SMARCB1-203ENST00000407082 HIVEP3Q5T1R4 2406 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 TRAV27A0A087WT01 109 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 ARPC4-TTLL3A0A0A6YYG9 625 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 CCDC182A6NF36 153 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 FAM183AA6NL82 134 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 C21orf140B9A014 251 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF264O43296 627 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 SEC14L5O43304 696 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 EIF4E2O60573 245 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms