RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 INIPQ9NRY2 104 aa3.34□□□□□ -1.88
RTN4-208ENST00000404909 RYDENQ9NUL5 291 aaKnown RBP3.34□□□□□ -1.88
RTN4-208ENST00000404909 TAS2R16Q9NYV7 291 aa3.34□□□□□ -1.88
RTN4-208ENST00000404909 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.34□□□□□ -1.881e-12■■□□□ 13.7
RTN4-208ENST00000404909 BAIAP2Q9UQB8 552 aa3.34□□□□□ -1.88
RTN4-208ENST00000404909 CORINQ9Y5Q5 1042 aa3.34□□□□□ -1.88
RTN4-208ENST00000404909 EFCAB10A6NFE3 127 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 FTCDNL1E5RQL4 147 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 XKRYO14609 159 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ARHGEF9O43307 516 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 DBTP11182 482 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 KLK2P20151 261 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 POU3F2P20265 443 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 MTNR1AP48039 350 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 NR1H2P55055 460 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 GABARAPL2P60520 117 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 RAC1P63000 192 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TUBA4AP68366 448 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 EFNB1P98172 346 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 POU3F1Q03052 451 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 MELKQ14680 651 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 MFSD13AQ14CX5 517 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ACKR1Q16570 336 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 OCLNQ16625 522 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 NADK2Q4G0N4 442 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 CRTC2Q53ET0 693 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 ZNF362Q5T0B9 420 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 GTF2IRD2BQ6EKJ0 949 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TMPPEQ6ZT21 453 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 GTF2IRD2Q86UP8 949 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TMEM251Q8N6I4 163 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 OR51G2Q8NGK0 314 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 OR6K6Q8NGW6 343 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SLC25A43Q8WUT9 341 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 IPCEF1Q8WWN9 437 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 PTP4A1Q93096 173 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 RFKQ969G6 155 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TMIGD2Q96BF3 282 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TSSK2Q96PF2 358 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TSPAN32Q96QS1 320 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 POTEKPQ9BYX7 375 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 DEFB127Q9H1M4 99 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 LDAHQ9H6V9 325 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 EXO5Q9H790 373 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ZNF703Q9H7S9 590 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 CCNB1IP1Q9NPC3 277 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 CHST11Q9NPF2 352 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 RPRD1BQ9NQG5 326 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 MED29Q9NX70 200 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ALKBH4Q9NXW9 302 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 KLHL13Q9P2N7 655 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ZNF346Q9UL40 294 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 RAXQ9Y2V3 346 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 BSNQ9UPA5 3926 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 A0A1W2PRG6 482 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 OR6C68A6NDL8 312 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 NPIPA5E9PKD4 350 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 MRPL3P09001 348 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 IFNGR1P15260 489 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ZNF17P17021 662 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SDHAP31040 664 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ACVR1BP36896 505 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 CDKN2AP42771 156 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 EIF1AXP47813 144 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 CENPAP49450 140 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 DLX5P56178 289 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 EMX1Q04741 257 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 KRR1Q13601 381 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 C1DQ13901 141 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 ANKDD1AQ495B1 522 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TMEM201Q5SNT2 666 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 AADACL4Q5VUY2 407 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 NXNL2Q5VZ03 156 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SLC22A16Q86VW1 577 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 ZADH2Q8N4Q0 377 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 LRRC75AQ8NAA5 344 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SYT14Q8NB59 555 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 OR4F15Q8NGB8 312 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SMAP2Q8WU79 429 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 NTNG2Q96CW9 530 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 FAM122AQ96E09 287 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 KLHL15Q96M94 604 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TBX5Q99593 518 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 EMC6Q9BV81 110 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 MFRPQ9BY79 579 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SYT4Q9H2B2 425 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SLC6A15Q9H2J7 730 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 SRA1Q9HD15 236 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 BATF3Q9NR55 127 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 PLCXD1Q9NUJ7 323 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 MRPL39Q9NYK5 338 aaKnown RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 NPIPA1Q9UND3 350 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 HDGFL3Q9Y3E1 203 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TRAV17A0A0B4J275 112 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 A0A0J9YW62 118 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 TRIM64A6NGJ6 449 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 GJE1A6NN92 205 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 KDM4EB2RXH2 506 aaPredicted RBP3.33□□□□□ -1.88
RTN4-208ENST00000404909 ZNF814B7Z6K7 855 aa3.33□□□□□ -1.88
RTN4-208ENST00000404909 MS4A18H0YCH9 400 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms