RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 BCL2L2Q92843 193 aaPredicted RBP11.64□□□□□ -0.55
SDF4-203ENST00000403997 LRRC58Q96CX6 371 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 BOD1Q96IK1 185 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 HS6ST2Q96MM7 605 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 ARHGDIGQ99819 225 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 SH3GL1Q99961 368 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 ECSITQ9BQ95 431 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 TMEM43Q9BTV4 400 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 GRIP2Q9C0E4 1043 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 OBP2BQ9NPH6 170 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 SAR1AQ9NR31 198 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 CORINQ9Y5Q5 1042 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 CSPG4Q6UVK1 2322 aa11.64□□□□□ -0.55
SDF4-203ENST00000403997 A0A096LPE4 126 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 LOC100653049A0A140TA62 436 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 A0A1W2PPZ6 126 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 MS4A18H0YCH9 400 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 MRASO14807 208 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 AKAP8O43823 692 aaKnown RBP11.63□□□□□ -0.55
SDF4-203ENST00000403997 NDUFS7O75251 213 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 KRT34O76011 436 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 ZNF432O94892 652 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 BGLAPP02818 100 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 HEXAP06865 529 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 ACVR1BP36896 505 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 GZMMP51124 257 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 GUCY1A3Q02108 690 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 MAPRE2Q15555 327 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 MS4A18Q3C1V0 323 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 HSP90B2PQ58FF3 399 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 RABL3Q5HYI8 236 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 ENTPD8Q5MY95 495 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 CARD17Q5XLA6 110 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 CGB2Q6NT52 195 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 ANKRD16Q6P6B7 361 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 B3GLCTQ6Y288 498 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 RBM45Q8IUH3 476 aaKnown RBP11.63□□□□□ -0.55
SDF4-203ENST00000403997 UEVLDQ8IX04 471 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 MUC15Q8N387 334 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 ADPRHL1Q8NDY3 354 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 OR4D11Q8NGI4 311 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 NANOS1Q8WY41 292 aaKnown RBP11.63□□□□□ -0.55
SDF4-203ENST00000403997 TAMM41Q96BW9 452 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 ADAD1Q96M93 576 aaKnown RBP11.63□□□□□ -0.55
SDF4-203ENST00000403997 MOGAT1Q96PD6 335 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 KCNS3Q9BQ31 491 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 CBLN4Q9NTU7 201 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 GDF2Q9UK05 429 aaPredicted RBP11.63□□□□□ -0.55
SDF4-203ENST00000403997 MOKQ9UQ07 419 aa11.63□□□□□ -0.55
SDF4-203ENST00000403997 BBIP1A8MTZ0 92 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 LRRN3E7EW58 273 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 ATP6V1G2-DDX39BF2Z307 99 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 TRAF3IP2O43734 574 aaPredicted RBP11.62□□□□□ -0.55
SDF4-203ENST00000403997 CHP2O43745 196 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 HPRP00739 348 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 NPPAP01160 153 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 IGHV4-39P01824 125 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 HLA-DOBP13765 273 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 CD247P20963 164 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 AHCYP23526 432 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 PAX7P23759 505 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 SH3BGRP55822 239 aaPredicted RBP11.62□□□□□ -0.55
SDF4-203ENST00000403997 TUBA1BP68363 451 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 TUBA4AP68366 448 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 ARF1P84077 181 aaKnown RBP11.62□□□□□ -0.55
SDF4-203ENST00000403997 NPTX1Q15818 432 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 REP15Q6BDI9 236 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 ZNF544Q6NX49 715 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 TTC33Q6PID6 262 aaPredicted RBP11.62□□□□□ -0.55
SDF4-203ENST00000403997 LINC00114Q6XXX2 140 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 TUBA1AQ71U36 451 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 CCDC80Q76M96 950 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 SNX32Q86XE0 403 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 SCAIQ8N9R8 606 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 PIK3C3Q8NEB9 887 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 OR8J3Q8NGG0 315 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 MAGEE2Q8TD90 523 aaPredicted RBP11.62□□□□□ -0.55
SDF4-203ENST00000403997 ADAMTS16Q8TE57 1224 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 RASSF5Q8WWW0 418 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 SLC41A3Q96GZ6 507 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 SLC38A2Q96QD8 506 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 OR2M2Q96R28 347 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 EMC6Q9BV81 110 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 CACNG6Q9BXT2 260 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 BARX1Q9HBU1 254 aaPredicted RBP11.62□□□□□ -0.55
SDF4-203ENST00000403997 CRLF2Q9HC73 371 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 GPR35Q9HC97 309 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 GID8Q9NWU2 228 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 MRPL39Q9NYK5 338 aaKnown RBP11.62□□□□□ -0.55
SDF4-203ENST00000403997 SLC7A7Q9UM01 511 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 NOX1Q9Y5S8 564 aa11.62□□□□□ -0.55
SDF4-203ENST00000403997 NIPBLQ6KC79 2804 aaeCLIP11.62□□□□□ -0.556e-10■□□□□ 8.9
SDF4-203ENST00000403997 ARPC4-TTLL3A0A0A6YYG9 625 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 IGHV1-18A0A0C4DH31 117 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 TRAPPC13A5PLN9 417 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 RNF223E7ERA6 249 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 RPL36A-HNRNPH2H7BZ11 118 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 M0R3G1 203 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 FXYD1O00168 92 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 PLPP3O14495 311 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms