RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 MRPS11P82912 194 aaKnown RBP10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 EGR4Q05215 589 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ZP4Q12836 540 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 SCGB2A2Q13296 93 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 GPAT3Q53EU6 434 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 KLF17Q5JT82 389 aaPredicted RBP10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 C1orf140Q5VVS0 124 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 PRAMEF8Q5VWM4 474 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 PRAMEF7Q5VXH5 474 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ZNF584Q8IVC4 421 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 TMEM123Q8N131 208 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 BPIFB2Q8N4F0 458 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 NATD1Q8N6N6 113 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 FNDC5Q8NAU1 212 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 FGFBP3Q8TAT2 258 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 NEURL3Q96EH8 262 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 RSPO3Q9BXY4 272 aaPredicted RBP10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 TSPYL1Q9H0U9 437 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CORINQ9Y5Q5 1042 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 VSTM5A8MXK1 200 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 RNASET2O00584 256 aaKnown RBP10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 TRIM13O60858 407 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 FZD7O75084 574 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CPSF4O95639 269 aaKnown RBP10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 BCL10O95999 233 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CHEK2O96017 543 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 TFPTP0C1Z6 253 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 PRTN3P24158 256 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 MAPK1P28482 360 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 MAP2K6P52564 334 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 PIGFQ07326 219 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CHI3L2Q15782 390 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ZNF311Q5JNZ3 666 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 COX20Q5RI15 118 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ATAD3BQ5T9A4 648 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 NHLRC1Q6VVB1 395 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 VRK2Q86Y07 508 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 C4orf33Q8N1A6 199 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CLIP4Q8N3C7 705 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 PAQR4Q8N4S7 273 aaPredicted RBP10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CCDC63Q8NA47 563 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 KTI12Q96EK9 354 aaPredicted RBP10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 OR2M2Q96R28 347 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 MS4A5Q9H3V2 200 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 SLC52A3Q9NQ40 469 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ZNF69Q9UC07 566 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 RASD1Q9Y272 281 aa10.13□□□□□ -0.79
SPTLC1P3-201ENST00000403408 A0A0G2JMP0 313 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 A0A0X1KG70 313 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CDHR4A6H8M9 788 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 A8MVM7 634 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 TRAF3IP2O43734 574 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 VAMP5O95183 116 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 HPRP00739 348 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 PATE4P0C8F1 98 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 HLA-DOBP13765 273 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 UQCRC2P22695 453 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CXCR1P25024 350 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ERVS71-1P61550 626 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CASP8Q14790 479 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 GSTA3Q16772 222 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 TMEM255AQ5JRV8 349 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 DCAF12L2Q5VW00 463 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ZNF836Q6ZNA1 936 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 TRMT10CQ7L0Y3 403 aaKnown RBP10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ZNF771Q7L3S4 317 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 DOK3Q7L591 496 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 RNF130Q86XS8 419 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CMIPQ8IY22 773 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ANKK1Q8NFD2 765 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 IL17RDQ8NFM7 739 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 OR4M2Q8NGB6 313 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 OR8J2Q8NGG1 315 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 NANPQ8TBE9 248 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 TRNT1Q96Q11 434 aaKnown RBP10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 PRPF18Q99633 342 aaKnown RBP10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ZNF416Q9BWM5 594 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 C7orf69Q9H7B7 122 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 DDX28Q9NUL7 540 aaKnown RBP10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 PDP1Q9P0J1 537 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 RCE1Q9Y256 329 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 WIPI2Q9Y4P8 454 aa10.12□□□□□ -0.79
SPTLC1P3-201ENST00000403408 NOTCH3Q9UM47 2321 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ZNF99A8MXY4 864 aaPredicted RBP10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 J3QLI3 93 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 M0R3G1 203 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 NPHS1O60500 1241 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 SLC43A1O75387 559 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 AGR2O95994 175 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CD79AP11912 226 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 MDKP21741 143 aaPredicted RBP10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CDKN2CP42773 168 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CAPZA2P47755 286 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CCT5P48643 541 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CCL8P80075 99 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 HOXC5Q00444 222 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CKAP4Q07065 602 aaKnown RBP10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 LRRC74BQ6ZQY2 392 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CADM2Q8N3J6 435 aa10.11□□□□□ -0.79
SPTLC1P3-201ENST00000403408 DEFB108BQ8NET1 73 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms