RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 PQLC1Q8N2U9 271 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 CLEC18CQ8NCF0 446 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 ICA1LQ8NDH6 482 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 ADPRHL1Q8NDY3 354 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 OR5K1Q8NHB7 308 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 GNPDA2Q8TDQ7 276 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 OXGR1Q96P68 337 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 SF3B5Q9BWJ5 86 aaKnown RBP14.17□□□□□ -0.14
HMGA1-204ENST00000401473 MCCC2Q9HCC0 563 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 IL20RAQ9UHF4 553 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 RASD1Q9Y272 281 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 FLVCR1Q9Y5Y0 555 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 PDLIM1O00151 329 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 PLGP00747 810 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-204ENST00000401473 TMIGD3P0DMS9 266 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-204ENST00000401473 IFNGR2P38484 337 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 ARHGDIAP52565 204 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 TSPAN31Q12999 210 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 PDK3Q15120 406 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 RCN1Q15293 331 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 CDSNQ15517 529 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 OR2A2Q6IF42 318 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 VWA1Q6PCB0 445 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 THSD4Q6ZMP0 1018 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 FAM214BQ7L5A3 538 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 NUFIP2Q7Z417 695 aaKnown RBP14.16□□□□□ -0.14
HMGA1-204ENST00000401473 NANOGNBQ7Z5D8 188 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 ZDHHC13Q8IUH4 622 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 LRRC75AQ8NAA5 344 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 OR9K2Q8NGE7 335 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 TXNDC15Q96J42 360 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 DGCR6LQ9BY27 220 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 RNF6Q9Y252 685 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 PRR14LQ5THK1 2151 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 A0A1W2PNV4 684 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 ARRDC5A6NEK1 342 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 UNC119BA6NIH7 251 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 ZG16O60844 167 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 SS18L1O75177 396 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-204ENST00000401473 IGFBP1P08833 259 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-204ENST00000401473 ANPEPP15144 967 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 AGTR1P30556 359 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 SLC9A3P48764 834 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 DAPP51397 102 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 POU4F3Q15319 338 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 CRYBG3Q68DQ2 2970 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 PXKQ7Z7A4 578 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 STK32CQ86UX6 486 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 MCEMP1Q8IX19 187 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 CNEP1R1Q8N9A8 125 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 STARD4Q96DR4 205 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 SMURF2Q9HAU4 748 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 KRCC1Q9NPI7 259 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-204ENST00000401473 GLRX2Q9NS18 164 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 MGAT4BQ9UQ53 548 aa14.16□□□□□ -0.14
HMGA1-204ENST00000401473 SAC3D1A6NKF1 404 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 ZNF724A8MTY0 619 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 RNF13O43567 381 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 TRAF3IP2O43734 574 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-204ENST00000401473 SERPINI2O75830 405 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 OR6A2O95222 327 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 TP53P04637 393 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-204ENST00000401473 ZNF43P17038 809 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 CTSSP25774 331 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 SIRPAP78324 504 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 BTLAQ7Z6A9 289 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 IGFN1Q86VF2 1251 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 KIF18BQ86Y91 864 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 HIPK1Q86Z02 1210 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 ZFP3Q96NJ6 502 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 CIB1Q99828 191 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 GP6Q9HCN6 339 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 MED29Q9NX70 200 aa14.15□□□□□ -0.14
HMGA1-204ENST00000401473 NKX1-2Q9UD57 310 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-204ENST00000401473 ZNF629Q9UEG4 869 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-204ENST00000401473 WIPF3A6NGB9 483 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 HSPB2A8KAH6 182 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 MCIDASD6RGH6 385 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 CGAP01215 116 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 IL1RL1Q01638 556 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 POU3F1Q03052 451 aaPredicted RBP14.14□□□□□ -0.15
HMGA1-204ENST00000401473 HSPB2Q16082 182 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 ALG10Q5BKT4 473 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 FAHD1Q6P587 224 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 KLHL17Q6TDP4 642 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 CD300LDQ6UXZ3 194 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.14□□□□□ -0.15
HMGA1-204ENST00000401473 EMC6Q9BV81 110 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 EGLN3Q9H6Z9 239 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 DCLRE1BQ9H816 532 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 IL20Q9NYY1 176 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 REV1Q9UBZ9 1251 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 H0YHG0 523 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 AGFG2O95081 481 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 ADAP00813 363 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 CRHP06850 196 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 ANXA8P13928 327 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 IFNGR1P15260 489 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 BMP5P22003 454 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 PRPS1P60891 318 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms