RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 MPEG1Q2M385 716 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 LYPD4Q6UWN0 246 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 SLC16A9Q7RTY1 509 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 CMIPQ8IY22 773 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 DUSP22Q9NRW4 184 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 CTSLP07711 333 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 LIPAP38571 399 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 OR4M1Q8NGD0 313 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 SLC23A2Q9UGH3 650 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 PADI1Q9ULC6 663 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 EMC9Q9Y3B6 208 aa16.79■□□□□ 0.28
COL18A1-204ENST00000400337 B8ZZF3 427 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 PPP2CBP62714 309 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 PPP2CAP67775 309 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 S100A12P80511 92 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 SH2D5Q6ZV89 423 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 OR5T1Q8NG75 326 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 SGPP1Q9BX95 441 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 OR52A5Q9H2C5 316 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 OSGIN1Q9UJX0 560 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 HLA-AP01891 365 aaKnown RBP16.78■□□□□ 0.28
COL18A1-204ENST00000400337 FCGR2AP12318 317 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 ABOP16442 354 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 MTCP1P56278 107 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 ERVK-16P61578 105 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 NLRP8Q86W28 1048 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 S100PBPQ96BU1 408 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 MKRN2Q9H000 416 aaKnown RBP16.78■□□□□ 0.28
COL18A1-204ENST00000400337 ACER3Q9NUN7 267 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 ANKRD10Q9NXR5 420 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 C19orf53Q9UNZ5 99 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-204ENST00000400337 A8MVM7 634 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 HTR2CP28335 458 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 BDKRB2P30411 391 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 MEP1BQ16820 701 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 ZNF454Q8N9F8 522 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 OR4K15Q8NH41 348 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 GIMAP5Q96F15 307 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 SLC35A4Q96G79 324 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 METTL9Q9H1A3 318 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 TRBV5-4A0A0C4DH59 114 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 FZD6O60353 706 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 SBK3P0C264 359 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 ARRB2P32121 409 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 TNK1Q13470 666 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 SYT6Q5T7P8 510 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-204ENST00000400337 PM20D2Q8IYS1 436 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 CLDN22Q8N7P3 220 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 HSD17B8Q92506 261 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 OR5B12Q96R08 314 aa16.78■□□□□ 0.28
COL18A1-204ENST00000400337 PHF7Q9BWX1 381 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-204ENST00000400337 NOSIPQ9Y314 301 aaKnown RBP16.78■□□□□ 0.28
COL18A1-204ENST00000400337 MTNR1BP49286 362 aa16.77■□□□□ 0.28
COL18A1-204ENST00000400337 GPLD1P80108 840 aa16.77■□□□□ 0.28
COL18A1-204ENST00000400337 AGAP7PQ5VUJ5 663 aa16.77■□□□□ 0.28
COL18A1-204ENST00000400337 OR5D18Q8NGL1 313 aa16.77■□□□□ 0.28
COL18A1-204ENST00000400337 Q96M85 177 aa16.77■□□□□ 0.28
COL18A1-204ENST00000400337 SDF2Q99470 211 aa16.77■□□□□ 0.28
COL18A1-204ENST00000400337 CMSS1Q9BQ75 279 aaKnown RBP16.77■□□□□ 0.28
COL18A1-204ENST00000400337 I6L893 689 aaPredicted RBP16.77■□□□□ 0.28
COL18A1-204ENST00000400337 SEC14L2O76054 403 aa16.77■□□□□ 0.28
COL18A1-204ENST00000400337 OR7C1O76099 320 aaPredicted RBP16.77■□□□□ 0.28
COL18A1-204ENST00000400337 APEX1P27695 318 aaKnown RBP16.77■□□□□ 0.28
COL18A1-204ENST00000400337 CLDN6P56747 220 aa16.77■□□□□ 0.28
COL18A1-204ENST00000400337 RAB5BP61020 215 aa16.77■□□□□ 0.28
COL18A1-204ENST00000400337 KRBOX4Q5JUW0 171 aa16.77■□□□□ 0.28
COL18A1-204ENST00000400337 P2RX6O15547 441 aa16.77■□□□□ 0.27
COL18A1-204ENST00000400337 FGF17O60258 216 aa16.77■□□□□ 0.27
COL18A1-204ENST00000400337 CLEC2LP0C7M8 214 aa16.77■□□□□ 0.27
COL18A1-204ENST00000400337 TDHQ8IZJ6 230 aa16.77■□□□□ 0.27
COL18A1-204ENST00000400337 MRGPRX1Q96LB2 322 aa16.77■□□□□ 0.27
COL18A1-204ENST00000400337 CD300LBA8K4G0 201 aa16.77■□□□□ 0.27
COL18A1-204ENST00000400337 YKT6O15498 198 aa16.77■□□□□ 0.27
COL18A1-204ENST00000400337 MFAP5Q13361 173 aa16.77■□□□□ 0.27
COL18A1-204ENST00000400337 F8W036 122 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 P2RY10O00398 339 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 GABARAPO95166 117 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 NID1P14543 1247 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 GDNFP39905 211 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 CARD18P57730 90 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 SNRPGP62308 76 aaKnown RBP16.76■□□□□ 0.27
COL18A1-204ENST00000400337 BLOC1S1P78537 153 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 RTL6Q6ICC9 239 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 GIMAP1Q8WWP7 306 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 PLEKHA3Q9HB20 300 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 DDAH2O95865 285 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 HOXB5P09067 269 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 TCN2P20062 427 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 TNFSF4P23510 183 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 ISL1P61371 349 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 ELAVL1Q15717 326 aaKnown RBP16.76■□□□□ 0.27
COL18A1-204ENST00000400337 C1orf140Q5VVS0 124 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 TMEM59Q9BXS4 323 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 OR14J1Q9UGF5 321 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 MED16Q9Y2X0 877 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 AGPAT2O15120 278 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 SELENOFO60613 162 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 IL32P24001 234 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 TAS2R20P59543 309 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 PIGQQ9BRB3 760 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms