RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 GLSO94925 669 aaPredicted RBP12.79□□□□□ -0.36
APOB-202ENST00000399256 MAS1P04201 325 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 CALCBP10092 127 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 MC2RQ01718 297 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.79□□□□□ -0.36
APOB-202ENST00000399256 OR51S1Q8NGJ8 323 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 TAS2R3Q9NYW6 316 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 SERTAD3Q9UJW9 196 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 LDB3O75112 727 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 FAUP35544 74 aaKnown RBP12.79□□□□□ -0.36
APOB-202ENST00000399256 DIO1P49895 249 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 HTRA4P83105 476 aaPredicted RBP12.79□□□□□ -0.36
APOB-202ENST00000399256 GGTLC2Q14390 218 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 VN1R4Q7Z5H5 301 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 BPIFCQ8NFQ6 507 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 OR6K3Q8NGY3 331 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 OR8S1Q8NH09 359 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 OR8K3Q8NH51 312 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 DVL3Q92997 716 aaPredicted RBP12.79□□□□□ -0.36
APOB-202ENST00000399256 PLCL2Q9UPR0 1127 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 C4orf47A7E2U8 309 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 PRICKLE3O43900 615 aaPredicted RBP12.79□□□□□ -0.36
APOB-202ENST00000399256 ADH1AP07327 375 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 LINC00271P0C7V0 271 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 OR8G3PP0DMU2 310 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 RPL35P42766 123 aaKnown RBP12.79□□□□□ -0.36
APOB-202ENST00000399256 EMDP50402 254 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 AKR1D1P51857 326 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 ERVK-25P63136 954 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 LTBQ06643 244 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 GAS6Q14393 721 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 ALG10BQ5I7T1 473 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 DUSP19Q8WTR2 217 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 PHYHIPQ92561 330 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 RASD2Q96D21 266 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 Q96M85 177 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 CPNE7Q9UBL6 633 aa12.79□□□□□ -0.36
APOB-202ENST00000399256 A0A1B0GTH9 108 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 H0YC42 278 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 NDUFB2O95178 105 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 CD1AP06126 327 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 GTF2F2P13984 249 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 CPMP14384 443 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 SPI1P17947 270 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 CMPK1P30085 196 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 GABRA3P34903 492 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 TSFMP43897 325 aaKnown RBP12.78□□□□□ -0.36
APOB-202ENST00000399256 RUNX2Q13950 521 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 HYAL4Q2M3T9 481 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 PDSS1Q5T2R2 415 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 PSRC1Q6PGN9 363 aaPredicted RBP12.78□□□□□ -0.36
APOB-202ENST00000399256 MCATQ8IVS2 390 aaKnown RBP12.78□□□□□ -0.36
APOB-202ENST00000399256 WFIKKN2Q8TEU8 576 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 NKX6-2Q9C056 277 aaPredicted RBP12.78□□□□□ -0.36
APOB-202ENST00000399256 SLITRK2Q9H156 845 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 ZNF230Q9UIE0 474 aaPredicted RBP12.78□□□□□ -0.36
APOB-202ENST00000399256 INSL6Q9Y581 213 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 DOCK9Q9BZ29 2069 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 OR6C68A6NDL8 312 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 RPA2P15927 270 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 ZNF234Q14588 700 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 KCNAB1Q14722 419 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 ODF4Q2M2E3 257 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 SLC35F3Q8IY50 421 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 NSMAFQ92636 917 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 GAL3ST3Q96A11 431 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 SLC25A28Q96A46 364 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 KCNK15Q9H427 330 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 EXO5Q9H790 373 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 PRDM9Q9NQV7 894 aa12.78□□□□□ -0.36
APOB-202ENST00000399256 C19orf53Q9UNZ5 99 aaPredicted RBP12.78□□□□□ -0.36
APOB-202ENST00000399256 H7C417 338 aa12.77□□□□□ -0.36
APOB-202ENST00000399256 EFNB2P52799 333 aa12.77□□□□□ -0.36
APOB-202ENST00000399256 FLI1Q01543 452 aaPredicted RBP12.77□□□□□ -0.36
APOB-202ENST00000399256 RNF166Q96A37 237 aaPredicted RBP12.77□□□□□ -0.36
APOB-202ENST00000399256 SLC25A32Q9H2D1 315 aa12.77□□□□□ -0.36
APOB-202ENST00000399256 MTFP1Q9UDX5 166 aa12.77□□□□□ -0.36
APOB-202ENST00000399256 TRAV14DV4A0A0A6YYC5 116 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 EGFP01133 1207 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 ANXA2P07355 339 aaKnown RBP12.77□□□□□ -0.37
APOB-202ENST00000399256 DDX6P26196 483 aaKnown RBP eCLIP12.77□□□□□ -0.37
APOB-202ENST00000399256 ZNF511Q8NB15 262 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 NPEPL1Q8NDH3 523 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 OR4E2Q8NGC2 313 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 RAB11FIP5Q9BXF6 653 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 C14orf105Q9NVL8 296 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 GMEB2Q9UKD1 530 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 ENTPD2Q9Y5L3 495 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 TRPM6Q9BX84 2022 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 TRAV8-7A0A075B6U6 113 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 STARP49675 285 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 VASPP50552 380 aaPredicted RBP12.77□□□□□ -0.37
APOB-202ENST00000399256 FHL5Q5TD97 284 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 ZNF425Q6IV72 752 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 ZNF546Q86UE3 836 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 HERVK_113Q902F9 699 aa12.77□□□□□ -0.37
APOB-202ENST00000399256 NKX3-1Q99801 234 aaPredicted RBP12.77□□□□□ -0.37
APOB-202ENST00000399256 NOTCH4Q99466 2003 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 HIDE1A8MVS5 230 aa12.76□□□□□ -0.37
APOB-202ENST00000399256 PPM1AP35813 382 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms