RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 PUDPQ08623 228 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 KEAP1Q14145 624 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 GLYATQ6IB77 296 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PAMR1Q6UXH9 720 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NHLRC1Q6VVB1 395 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 FKBP9P1Q75LS8 142 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 WDFY1Q8IWB7 410 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 UEVLDQ8IX04 471 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PGAM4Q8N0Y7 254 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 CCDC197Q8NCU1 140 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OR5J2Q8NH18 312 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MUCL1Q96DR8 90 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TXNDC15Q96J42 360 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MUS81Q96NY9 551 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 CDRT15Q96T59 188 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 EMC6Q9BV81 110 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SLC19A3Q9BZV2 496 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 UBTD1Q9HAC8 227 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NANSQ9NR45 359 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 C20orf141Q9NUB4 165 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MED29Q9NX70 200 aa12.38□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ENO4A6NNW6 628 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 FFAR1O14842 300 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MT-ND1P03886 318 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 IFNW1P05000 195 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MPGP29372 298 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NR1H2P55055 460 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MXRA7P84157 204 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 IFI44LQ53G44 452 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OR7E24Q6IFN5 339 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SLC46A3Q7Z3Q1 461 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 DEFB107AQ8IZN7 70 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 FAM86B1Q8N7N1 296 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TMEM239Q8WW34 195 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 GEMIN6Q8WXD5 167 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PRRC1Q96M27 445 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 USB1Q9BQ65 265 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 C1QTNF6Q9BXI9 259 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 POLR2J2Q9GZM3 115 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 POLR2J3Q9H1A7 115 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TAS2R5Q9NYW4 299 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 RCE1Q9Y256 329 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 DPRXA6NFQ7 191 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ATE1O95260 518 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 RAF1P04049 648 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ASAH2BP0C7U1 165 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 UMPSP11172 480 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 DNASE1P24855 282 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 CADP27708 2225 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ART1P52961 327 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 BSPH1Q075Z2 132 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 KRT72Q14CN4 511 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TESK1Q15569 626 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 HIKESHIQ53FT3 197 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NCMAPQ5T1S8 102 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 CARD17Q5XLA6 110 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ZNF704Q6ZNC4 412 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TSEN54Q7Z6J9 526 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 P2RY8Q86VZ1 359 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TMEM123Q8N131 208 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 WDR31Q8NA23 367 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NINJ1Q92982 152 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ZNF837Q96EG3 531 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OR2M2Q96R28 347 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TMEM204Q9BSN7 226 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 FKRPQ9H9S5 495 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NGBQ9NPG2 151 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MAN2C1Q9NTJ4 1040 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 CD300AQ9UGN4 299 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SLC25A15Q9Y619 301 aa12.37□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SLC35F4A4IF30 521 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 B2RBV5 119 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ZNF587BE7ETH6 402 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 BLOC1S5-TXNDC5H3BN57 136 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 CLOCKO15516 846 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PIP5K1CO60331 668 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SLC43A1O75387 559 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 THRBP10828 461 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 HSD17B1P14061 328 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 CD53P19397 219 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 RBM34P42696 430 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TGFBR3Q03167 851 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ST3GAL3Q11203 375 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PHYHD1Q5SRE7 291 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PXKQ7Z7A4 578 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 LURAP1LQ8IV03 231 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 LILRB1Q8NHL6 650 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NEUROG1Q92886 237 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 LINC00470Q9BZP3 86 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ESRP2Q9H6T0 727 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 DCAF13Q9NV06 445 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ZNF229Q9UJW7 825 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NOX1Q9Y5S8 564 aa12.36□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ZNF469Q96JG9 3925 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PRRC2AP48634 2157 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OR6C65A6NJZ3 312 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 RNF13O43567 381 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PRSS23O95084 383 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OR6A2O95222 327 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 HIST1H2ABP04908 130 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms