RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 MUS81Q96NY9 551 aa12.55□□□□□ -0.4
RAB1A-201ENST00000398529 ZNF607Q96SK3 696 aa12.55□□□□□ -0.4
RAB1A-201ENST00000398529 KCNS3Q9BQ31 491 aa12.55□□□□□ -0.4
RAB1A-201ENST00000398529 BTBD10Q9BSF8 475 aa12.55□□□□□ -0.4
RAB1A-201ENST00000398529 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.55□□□□□ -0.4
RAB1A-201ENST00000398529 PARPBPQ9NWS1 579 aa12.55□□□□□ -0.4
RAB1A-201ENST00000398529 UPB1Q9UBR1 384 aa12.55□□□□□ -0.4
RAB1A-201ENST00000398529 CD300AQ9UGN4 299 aa12.55□□□□□ -0.4
RAB1A-201ENST00000398529 PRPF19Q9UMS4 504 aaKnown RBP12.55□□□□□ -0.4
RAB1A-201ENST00000398529 AMDHD2Q9Y303 409 aa12.55□□□□□ -0.4
RAB1A-201ENST00000398529 IGKV3D-15A0A087WSY6 115 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 GSTA4O15217 222 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 GYG2O15488 501 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 WNT11O96014 354 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 FKBP2P26885 142 aaKnown RBP12.54□□□□□ -0.4
RAB1A-201ENST00000398529 AQP1P29972 269 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 RASSF2P50749 326 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 CEACAM7Q14002 265 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 GABRA6Q16445 453 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 SPATS1Q496A3 300 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 DNAL1Q4LDG9 190 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 SYT14P1Q58G82 188 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 C12orf54Q6X4T0 127 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 CCDC80Q76M96 950 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 SLC46A3Q7Z3Q1 461 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 PATL1Q86TB9 770 aaKnown RBP12.54□□□□□ -0.4
RAB1A-201ENST00000398529 VRK2Q86Y07 508 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 KRT73Q86Y46 540 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 C17orf78Q8N4C9 275 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 ZNF563Q8TA94 476 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 MSI2Q96DH6 328 aaKnown RBP12.54□□□□□ -0.4
RAB1A-201ENST00000398529 VRK1Q99986 396 aaPredicted RBP12.54□□□□□ -0.4
RAB1A-201ENST00000398529 SPATA5L1Q9BVQ7 753 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 LAT2Q9GZY6 243 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 CACYBPQ9HB71 228 aaKnown RBP12.54□□□□□ -0.4
RAB1A-201ENST00000398529 ZNF443Q9Y2A4 671 aaPredicted RBP12.54□□□□□ -0.4
RAB1A-201ENST00000398529 IFT52Q9Y366 437 aa12.54□□□□□ -0.4
RAB1A-201ENST00000398529 SLC35F4A4IF30 521 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 M0QX08 132 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 CXCR6O00574 342 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 SERPINB7O75635 380 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 CSTAP01040 98 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 ERCC1P07992 297 aaPredicted RBP12.53□□□□□ -0.4
RAB1A-201ENST00000398529 IL7RP16871 459 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 EDNRAP25101 427 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 APOBEC1P41238 236 aaKnown RBP12.53□□□□□ -0.4
RAB1A-201ENST00000398529 SESN3P58005 492 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 PRPS1P60891 318 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 NCALDP61601 193 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 KCNJ10P78508 379 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 LARS2Q15031 903 aaKnown RBP12.53□□□□□ -0.4
RAB1A-201ENST00000398529 LIN52Q52LA3 116 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 ZNF311Q5JNZ3 666 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 B3GLCTQ6Y288 498 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 ZNF836Q6ZNA1 936 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 EIF3MQ7L2H7 374 aaKnown RBP12.53□□□□□ -0.4
RAB1A-201ENST00000398529 CMIPQ8IY22 773 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 FAM156AQ8NDB6 213 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 THTPAQ9BU02 230 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 MALT1Q9UDY8 824 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 ZNF232Q9UNY5 417 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 SLC35A3Q9Y2D2 325 aa12.53□□□□□ -0.4
RAB1A-201ENST00000398529 ARFGEF3Q5TH69 2177 aa12.52□□□□□ -0.4
RAB1A-201ENST00000398529 CLDN24A6NM45 220 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 VSTM5A8MXK1 200 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 ETV2O00321 342 aaPredicted RBP12.52□□□□□ -0.41
RAB1A-201ENST00000398529 DNPH1O43598 174 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 DNAJC8O75937 253 aaPredicted RBP12.52□□□□□ -0.41
RAB1A-201ENST00000398529 LY6HO94772 140 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 MFN2O95140 757 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 OPN1SWP03999 348 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 TCN1P20061 433 aaPredicted RBP12.52□□□□□ -0.41
RAB1A-201ENST00000398529 PGM1P36871 562 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 CR1LQ2VPA4 569 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 MRPL2Q5T653 305 aaKnown RBP12.52□□□□□ -0.41
RAB1A-201ENST00000398529 ABLIM2Q6H8Q1 611 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 CASP12Q6UXS9 341 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 ARMC8Q8IUR7 673 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 FAM71CQ8NEG0 241 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 C1orf162Q8NEQ5 155 aaPredicted RBP12.52□□□□□ -0.41
RAB1A-201ENST00000398529 TAMM41Q96BW9 452 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 FOXN4Q96NZ1 517 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 PRR14Q9BWN1 585 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 RSPO3Q9BXY4 272 aaPredicted RBP12.52□□□□□ -0.41
RAB1A-201ENST00000398529 ACER3Q9NUN7 267 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 EGFL7Q9UHF1 273 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 FBXO9Q9UK97 447 aaPredicted RBP12.52□□□□□ -0.41
RAB1A-201ENST00000398529 HDGFL3Q9Y3E1 203 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 ANK2Q01484 3957 aa12.52□□□□□ -0.41
RAB1A-201ENST00000398529 VWC2LB2RUY7 222 aa12.51□□□□□ -0.41
RAB1A-201ENST00000398529 GSC2O15499 205 aa12.51□□□□□ -0.41
RAB1A-201ENST00000398529 TPST1O60507 370 aa12.51□□□□□ -0.41
RAB1A-201ENST00000398529 BCAS1O75363 584 aaPredicted RBP12.51□□□□□ -0.41
RAB1A-201ENST00000398529 PDE5AO76074 875 aa12.51□□□□□ -0.41
RAB1A-201ENST00000398529 PMS2P2O95744 297 aa12.51□□□□□ -0.41
RAB1A-201ENST00000398529 UBTFL6P0CB48 400 aaPredicted RBP12.51□□□□□ -0.41
RAB1A-201ENST00000398529 NCK1P16333 377 aa12.51□□□□□ -0.41
RAB1A-201ENST00000398529 ZNF23P17027 643 aa12.51□□□□□ -0.41
RAB1A-201ENST00000398529 PCMT1P22061 227 aa12.51□□□□□ -0.41
RAB1A-201ENST00000398529 PRKAR1BP31321 381 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms