RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SYT14Q8NB59 555 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 NPEPL1Q8NDH3 523 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 OR6X1Q8NH79 312 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 OMA1Q96E52 524 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 USB1Q9BQ65 265 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 OR8D2Q9GZM6 311 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 HLA-DMAP28067 261 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 NUP62P37198 522 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CD96P40200 585 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 RNF4P78317 190 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 PPA1Q15181 289 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 LTB4RQ15722 352 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 TRIM73Q86UV7 250 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 KIF18BQ86Y91 864 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 LRRC75AQ8NAA5 344 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 OR1L3Q8NH93 324 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 ELP5Q8TE02 316 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 C1GALT1C1Q96EU7 318 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 PELI1Q96FA3 418 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 PEX11GQ96HA9 241 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 UQCC2Q9BRT2 126 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 DNAJC27Q9NZQ0 273 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF281Q9Y2X9 895 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 MRPS2Q9Y399 296 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 TRBV5-5A0A0J9YX44 114 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 LOC390937A0A1W2PQ73 354 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 ADAM10O14672 748 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 RGS9O75916 674 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 ECDO95905 644 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 BCAP31P51572 246 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 MRPS34P82930 218 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 DUSP2Q05923 314 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CCDC157Q569K6 752 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 C1orf140Q5VVS0 124 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SNIP1Q8TAD8 396 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SMIM4Q8WVI0 70 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SGCDQ92629 289 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 MRPS24Q96EL2 167 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 TIMP4Q99727 224 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CHCHD6Q9BRQ6 235 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 PLA2G12AQ9BZM1 189 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 PCNTO95613 3336 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 C7orf66A4D0T2 115 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 AIPO00170 330 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 OR6A2O95222 327 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 RPL27P61353 136 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SPCS2Q15005 226 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SF3A2Q15428 464 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 HYAL4Q2M3T9 481 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 RPS26P11Q5JNZ5 115 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 C10orf128Q5T292 105 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CACUL1Q86Y37 369 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 RAB43Q86YS6 212 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 OR5T3Q8NGG3 340 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 PAQR8Q8TEZ7 354 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 OR8B4Q96RC9 309 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 INTS14Q96SY0 518 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 MARVELD1Q9BSK0 173 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 PCDHB16Q9NRJ7 776 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SLC22A11Q9NSA0 550 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CYB5R1Q9UHQ9 305 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 MKL2Q9ULH7 1088 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 A0A1B0GVI7 797 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 A0A1W2PRG6 482 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 KHDRBS3O75525 346 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CHRM2P08172 466 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SPI1P17947 270 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 FAUP35544 74 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 NCS1P62166 190 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 PPP1R8Q12972 351 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 THEM4Q5T1C6 240 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 ZBTB37Q5TC79 503 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 RPS19BP1Q86WX3 136 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 TIGD4Q8IY51 512 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CCDC36Q8IYA8 594 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 NUDT8Q8WV74 236 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 RNFT2Q96EX2 444 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SAMD8Q96LT4 415 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CRB3Q9BUF7 120 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 EXOSC4Q9NPD3 245 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 NUFIP1Q9UHK0 495 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CPSF4LA6NMK7 179 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 DIRAS3O95661 229 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ACHEP22303 614 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CSF2RBP32927 897 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ACTBP60709 375 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ACTG1P63261 375 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CSNK2A1P68400 391 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CRYZQ08257 329 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 OR6M1Q8NGM8 313 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 MOSPD2Q8NHP6 518 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 MCHR2Q969V1 340 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 DDIT4LQ96D03 193 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 GPA33Q99795 319 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PLEKHA1Q9HB21 404 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ACOXLQ9NUZ1 547 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 HHLA2Q9UM44 414 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ZFYVE26Q68DK2 2539 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 OR4C45A6NMZ5 311 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ORC5O43913 435 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms