RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 RGS21Q2M5E4 152 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 SLC36A2Q495M3 483 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 C8orf82Q6P1X6 216 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 UGT2A3Q6UWM9 527 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 GDPGP1Q6ZNW5 385 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 TIGD4Q8IY51 512 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 OR2V1Q8NHB1 315 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 GGHQ92820 318 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF582Q96NG8 517 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 OXGR1Q96P68 337 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 GNRHR2Q96P88 292 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 POTEKPQ9BYX7 375 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 C12orf10Q9HB07 376 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 KLHL13Q9P2N7 655 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 SYT7O43581 403 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 GDF9O60383 454 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CT45A8P0DMV1 189 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CT45A9P0DMV2 189 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 SRD5A2P31213 254 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 EIF2S3P41091 472 aaKnown RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 MEOX1P50221 254 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 DUSP2Q05923 314 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 TBCEQ15813 527 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CT45A2Q5DJT8 189 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 TMEM244Q5VVB8 128 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 B3GNTL1Q67FW5 361 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 LRRN1Q6UXK5 716 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 C9orf40Q8IXQ3 194 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ENTHD1Q8IYW4 607 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 KDM8Q8N371 416 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ARIH2OSQ8N7S6 290 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ZFP41Q8N8Y5 198 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 GPR148Q8TDV2 347 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 SPRYD4Q8WW59 207 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CPNE4Q96A23 557 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 C3orf49Q96BT1 292 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 C12orf43Q96C57 262 aaKnown RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 GABARAPL3Q9BY60 117 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 OR10A2Q9H208 303 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CHMP1AQ9HD42 196 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 MCUBQ9NWR8 336 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 BABAM2Q9NXR7 383 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 SCN3AQ9NY46 2000 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF593O00488 134 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CAPZA1P52907 286 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 RPL18Q07020 188 aaKnown RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ACKR1Q16570 336 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 FAHD1Q6P587 224 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ESPNLQ6ZVH7 1005 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF321PQ8N8H1 164 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 OR5L1Q8NGL2 311 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 RASD2Q96D21 266 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 GAL3ST1Q99999 423 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ZC4H2Q9NQZ6 224 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CMC2Q9NRP2 79 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 GPR27Q9NS67 375 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 COQ3Q9NZJ6 369 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 EXO1Q9UQ84 846 aaKnown RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 PCDHGA3Q9Y5H0 932 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 TCF20Q9UGU0 1960 aaKnown RBP7.52□□□□□ -1.21
PTPRD-204ENST00000397606 A0A075B6Q4 140 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 MEGF11A6BM72 1044 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 C4orf51C9J302 202 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 VBP1P61758 197 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ADARB1P78563 741 aaKnown RBP7.52□□□□□ -1.21
PTPRD-204ENST00000397606 SEC23BQ15437 767 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 OCLNQ16625 522 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 SMN1Q16637 294 aaKnown RBP7.52□□□□□ -1.21
PTPRD-204ENST00000397606 MRPL21Q7Z2W9 205 aaKnown RBP7.52□□□□□ -1.21
PTPRD-204ENST00000397606 SPARTQ8N0X7 666 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 OR4F15Q8NGB8 312 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 FAR1Q8WVX9 515 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 LGALS12Q96DT0 336 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 FAM122AQ96E09 287 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 TSPAN10Q9H1Z9 355 aaPredicted RBP7.52□□□□□ -1.21
PTPRD-204ENST00000397606 MED20Q9H944 212 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 AASSQ9UDR5 926 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 GRIP1Q9Y3R0 1128 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 GLCEO94923 617 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 CTSBP07858 339 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ARFRP1Q13795 201 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 CNPY1Q3B7I2 92 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF404Q494X3 552 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 WIPI1Q5MNZ9 446 aaPredicted RBP7.52□□□□□ -1.21
PTPRD-204ENST00000397606 C9orf135Q5VTT2 229 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF813Q6ZN06 617 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 LACC1Q8IV20 430 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 C4orf36Q96KX1 117 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF700Q9H0M5 742 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 NIPAL2Q9H841 368 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 WDR76Q9H967 626 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ANKRD36A6QL64 1941 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 METTL15A6NJ78 407 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 LCKP06239 509 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 CD59P13987 128 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 GCH1P30793 250 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 SCN1BQ07699 218 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 C22orf42Q6IC83 251 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF574Q6ZN55 896 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms