RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 THAP5Q7Z6K1 395 aa15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 TMEM99Q8N816 258 aa15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 ABTB1Q969K4 478 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 IFT27Q9BW83 186 aa15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 TSPAN10Q9H1Z9 355 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 FANCFQ9NPI8 374 aa15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 PLSCR2Q9NRY7 297 aa15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 SPRR3Q9UBC9 169 aa15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 BAIAP2Q9UQB8 552 aa15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 RNF6Q9Y252 685 aa15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 B3GALT5Q9Y2C3 310 aa15.16■□□□□ 0.02
TSPAN4-205ENST00000397406 NBPF19A0A087WUL8 3843 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 UTP20O75691 2785 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 PRRC2CQ9Y520 2896 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 A0A1B0GVC2 190 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 A0A1W2PNV4 684 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 ZNF814B7Z6K7 855 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 DNPH1O43598 174 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 F13BP05160 661 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 GABRB1P18505 474 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 RPL4P36578 427 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 H3F3AP84243 136 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 EFNB1P98172 346 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 IL5RAQ01344 420 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 PUDPQ08623 228 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 MAD2L1BPQ15013 274 aaPredicted RBP15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 HBMQ6B0K9 141 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 PAQR6Q6TCH4 344 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 CASP12Q6UXS9 341 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 UBQLNLQ8IYU4 475 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 DEPDC4Q8N2C3 294 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 OR2V1Q8NHB1 315 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 KATNB1Q9BVA0 655 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 POLDIP3Q9BY77 421 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 SRXN1Q9BYN0 137 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 LDAHQ9H6V9 325 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 IMPAD1Q9NX62 359 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 TVP23BQ9NYZ1 205 aa15.15■□□□□ 0.02
TSPAN4-205ENST00000397406 AQP7P3A6NL99 342 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 C11orf98E9PRG8 122 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 ARPC3O15145 178 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 SURF4O15260 269 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 OR6A2O95222 327 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 CD14P08571 375 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 APEHP13798 732 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 KLK2P20151 261 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 PCYT1AP49585 367 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 AGFG1P52594 562 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 CTXN1P60606 82 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 RAC3P60763 192 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 MYBPC1Q00872 1141 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 LAIR2Q6ISS4 152 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 KRT80Q6KB66 452 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 FAM122BQ7Z309 247 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 OR10D3Q8NH80 312 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 RHOXF1Q8NHV9 184 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 APH1BQ8WW43 257 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 ERMAPQ96PL5 475 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 TIMP4Q99727 224 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 NDEL1Q9GZM8 345 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 EXO5Q9H790 373 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 INIPQ9NRY2 104 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 AASSQ9UDR5 926 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 ADAM18Q9Y3Q7 739 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 IER3IP1Q9Y5U9 82 aa15.14■□□□□ 0.01
TSPAN4-205ENST00000397406 NPIPA5E9PKD4 350 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 RNF13O43567 381 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 CXCL13O43927 109 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 PRKYO43930 277 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 EIF1BO60739 113 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 WBP4O75554 376 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 CRYABP02511 175 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 HMGN1P05114 100 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 CARD18P57730 90 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 SNRPGP62308 76 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 ERVK-25P63136 954 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 CDK5R2Q13319 367 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 SNAPC1Q16533 368 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 ZNF362Q5T0B9 420 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 PDSS1Q5T2R2 415 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 ARHGAP11AQ6P4F7 1023 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 UGT2A3Q6UWM9 527 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 PTCHD4Q6ZW05 846 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 CCDC103Q8IW40 242 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 KDM8Q8N371 416 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 CNIH3Q8TBE1 160 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 TRUB1Q8WWH5 349 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 SLC38A2Q96QD8 506 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 TEX12Q9BXU0 123 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 PRRG3Q9BZD7 231 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 CMC2Q9NRP2 79 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 RASSF1Q9NS23 344 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 B3GAT1Q9P2W7 334 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 NPIPA1Q9UND3 350 aa15.13■□□□□ 0.01
TSPAN4-205ENST00000397406 AQP7O14520 342 aa15.12■□□□□ 0.01
TSPAN4-205ENST00000397406 IMPA2O14732 288 aa15.12■□□□□ 0.01
TSPAN4-205ENST00000397406 SMAD9O15198 467 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-205ENST00000397406 IDH3BO43837 385 aa15.12■□□□□ 0.01
TSPAN4-205ENST00000397406 MPZL2O60487 215 aa15.12■□□□□ 0.01
TSPAN4-205ENST00000397406 RAMP1O60894 148 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms