RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 A0A1W2PRG6 482 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 PTGES3LE9PB15 166 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 PRR23D1E9PI22 279 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 M0R129 80 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 RNF13O43567 381 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 SLC2A10O95528 541 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 TFAP2AP05549 437 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 PRR23D2P0DMB1 279 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 HIST1H1CP16403 213 aaKnown RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 EEF1B2P24534 225 aaKnown RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 HTR1FP30939 366 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 SFTPDP35247 375 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 MAGEA5P43359 124 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 RPL5P46777 297 aaKnown RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 SLC25A1P53007 311 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 NR1H2P55055 460 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 RPL27P61353 136 aaKnown RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 POU4F3Q15319 338 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 INAQ16352 499 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 KLHL22Q53GT1 634 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 SLC35F1Q5T1Q4 408 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 PDSS1Q5T2R2 415 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 CXXC5Q7LFL8 322 aaKnown RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 GGNQ86UU5 652 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 LSRQ86X29 649 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 SLC37A3Q8NCC5 494 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 ZNF519Q8TB69 540 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 Q96M85 177 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 OXGR1Q96P68 337 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 TMEM185BQ9H7F4 350 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 PAK1IP1Q9NWT1 392 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 PAQR5Q9NXK6 330 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 DNAJC27Q9NZQ0 273 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 WARS2Q9UGM6 360 aaKnown RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 ZNF346Q9UL40 294 aaKnown RBP12.2□□□□□ -0.46
MCF2L-209ENST00000397036 ADAM18Q9Y3Q7 739 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 A6NIZ1 184 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 SLC22A31A6NKX4 558 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 RGS10O43665 173 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 SMNDC1O75940 238 aaKnown RBP eCLIP12.19□□□□□ -0.46
MCF2L-209ENST00000397036 AKR7A3O95154 331 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 IGHG3P01860 377 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 F13BP05160 661 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 CDK1P06493 297 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 HTR1AP08908 422 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 DBTP11182 482 aaKnown RBP12.19□□□□□ -0.46
MCF2L-209ENST00000397036 JUNBP17275 347 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-209ENST00000397036 POU3F2P20265 443 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-209ENST00000397036 TCEA1P23193 301 aaKnown RBP12.19□□□□□ -0.46
MCF2L-209ENST00000397036 ACVR2AP27037 513 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 DAP3P51398 398 aaKnown RBP12.19□□□□□ -0.46
MCF2L-209ENST00000397036 CDH15P55291 814 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 RAP1BP61224 184 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 RAP1AP62834 184 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 ZNF91Q05481 1191 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.19□□□□□ -0.46
MCF2L-209ENST00000397036 RAB40BQ12829 278 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 CRMP1Q14194 572 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 ZNF169Q14929 603 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-209ENST00000397036 ACKR1Q16570 336 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 TBR1Q16650 682 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 GXYLT1Q4G148 440 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 SLC35D3Q5M8T2 416 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 MEPCEQ7L2J0 689 aaKnown RBP12.19□□□□□ -0.46
MCF2L-209ENST00000397036 IGFN1Q86VF2 1251 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 TMEM99Q8N816 258 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 OR52E2Q8NGJ4 325 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 OR4K13Q8NH42 304 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 OR2V1Q8NHB1 315 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 NEIL3Q8TAT5 605 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 ZHX1-C8orf76Q96EF9 292 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 TSPAN32Q96QS1 320 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 COPS4Q9BT78 406 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 SF3B5Q9BWJ5 86 aaKnown RBP12.19□□□□□ -0.46
MCF2L-209ENST00000397036 TIGARQ9NQ88 270 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 B3GAT1Q9P2W7 334 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 SEC14L4Q9UDX3 406 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 GPR52Q9Y2T5 361 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 CSAG2Q9Y5P2 127 aa12.19□□□□□ -0.46
MCF2L-209ENST00000397036 IGF2RP11717 2491 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 TEX13CA0A0J9YWL9 993 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 A0A1B0GVC2 190 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 FAM166BA8MTA8 275 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 SLC2A5P22732 501 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 AHCYP23526 432 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 DCKP27707 260 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 MTNR1AP48039 350 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 LHX2P50458 406 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 CDH11P55287 796 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 CARD18P57730 90 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 HSF1Q00613 529 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 MVKQ03426 396 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 LGALS3BPQ08380 585 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 C19orf57Q0VDD7 668 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 NIPAL3Q6P499 406 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 PLBD1Q6P4A8 553 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 HDDC2Q7Z4H3 204 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 SPARTQ8N0X7 666 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 SVOPQ8N4V2 548 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 LSM14AQ8ND56 463 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms