RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 WISP1O95388 367 aa12.71□□□□□ -0.37
NUP98-204ENST00000397004 MST1P26927 711 aa12.71□□□□□ -0.37
NUP98-204ENST00000397004 SOX2P48431 317 aa12.71□□□□□ -0.37
NUP98-204ENST00000397004 NNATQ16517 81 aa12.71□□□□□ -0.37
NUP98-204ENST00000397004 ASPHD2Q6ICH7 369 aa12.71□□□□□ -0.37
NUP98-204ENST00000397004 OR1S1Q8NH92 325 aa12.71□□□□□ -0.37
NUP98-204ENST00000397004 ST8SIA4Q92187 359 aa12.71□□□□□ -0.37
NUP98-204ENST00000397004 SCARF2Q96GP6 870 aaPredicted RBP12.71□□□□□ -0.37
NUP98-204ENST00000397004 APOOQ9BUR5 198 aa12.71□□□□□ -0.37
NUP98-204ENST00000397004 V9GY05 133 aa12.71□□□□□ -0.37
NUP98-204ENST00000397004 IGKV1D-42A0A075B6H8 117 aa12.71□□□□□ -0.38
NUP98-204ENST00000397004 KAT7O95251 611 aa12.71□□□□□ -0.38
NUP98-204ENST00000397004 GIPP09681 153 aaPredicted RBP12.71□□□□□ -0.38
NUP98-204ENST00000397004 PSMA6P60900 246 aaKnown RBP12.71□□□□□ -0.38
NUP98-204ENST00000397004 POU4F2Q12837 409 aa12.71□□□□□ -0.38
NUP98-204ENST00000397004 NPSR1Q6W5P4 371 aa12.71□□□□□ -0.38
NUP98-204ENST00000397004 DND1Q8IYX4 353 aaKnown RBP12.71□□□□□ -0.38
NUP98-204ENST00000397004 STACQ99469 402 aa12.71□□□□□ -0.38
NUP98-204ENST00000397004 GAS2L1Q99501 681 aaPredicted RBP12.71□□□□□ -0.38
NUP98-204ENST00000397004 FBXL2Q9UKC9 423 aa12.71□□□□□ -0.38
NUP98-204ENST00000397004 ZNF281Q9Y2X9 895 aa12.71□□□□□ -0.38
NUP98-204ENST00000397004 A0A087WV62 115 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 MEIS3P1A6NDR6 274 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 ATP6V1G2-DDX39BF2Z307 99 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 KHDRBS3O75525 346 aaKnown RBP12.7□□□□□ -0.38
NUP98-204ENST00000397004 SERPINI2O75830 405 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 ABHD16AO95870 558 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 CD1AP06126 327 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 ACTA2P62736 377 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 ACTG2P63267 376 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 TFF2Q03403 129 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 TMEM69Q5SWH9 247 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 TFAP2EQ6VUC0 442 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 OR4C3Q8NH37 302 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 FCAMRQ8WWV6 532 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 FBXW5Q969U6 566 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 LMF1Q96S06 567 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 SLC17A9Q9BYT1 436 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 TMEM27Q9HBJ8 222 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 GRXCR1A8MXD5 290 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 L7N2F9 121 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 BET1O15155 118 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 NKX2-2O95096 273 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 MYOGP15173 224 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 MAT1AQ00266 395 aaKnown RBP12.7□□□□□ -0.38
NUP98-204ENST00000397004 OR6V1Q8N148 313 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 MUC20Q8N307 709 aaPredicted RBP12.7□□□□□ -0.38
NUP98-204ENST00000397004 EXD3Q8N9H8 876 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 PRSS38A1L453 326 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 H0YGG7 62 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 CTNSO60931 367 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 KDM4BO94953 1096 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 SLC35G6P0C7Q6 338 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 PGDP52209 483 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 ARF3P61204 181 aaPredicted RBP12.7□□□□□ -0.38
NUP98-204ENST00000397004 POMGNT2Q8NAT1 580 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 TSACCQ96A04 125 aaPredicted RBP12.7□□□□□ -0.38
NUP98-204ENST00000397004 CMTM3Q96MX0 182 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 ULBP3Q9BZM4 244 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 C12orf4Q9NQ89 552 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 EMC3Q9P0I2 261 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 FANCMQ8IYD8 2048 aa12.7□□□□□ -0.38
NUP98-204ENST00000397004 TMEM72A0PK05 275 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 B3GALT2O43825 422 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 PRAF2O60831 178 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 NDUFB2O95178 105 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 GPR75O95800 540 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 HIST1H2ABP04908 130 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 HNRNPA1P09651 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
NUP98-204ENST00000397004 GABRA1P14867 456 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 ITPKBP27987 946 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 ZNF273Q14593 569 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 ZNF660Q6AZW8 331 aaPredicted RBP12.69□□□□□ -0.38
NUP98-204ENST00000397004 BAIAP2L2Q6UXY1 529 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 HIST3H2AQ7L7L0 130 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 RD3Q7Z3Z2 195 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 OR4C16Q8NGL9 310 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 C1orf216Q8TAB5 229 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 HIST1H2ACQ93077 130 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 AMELYQ99218 206 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 WDR13Q9H1Z4 485 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 PPA2Q9H2U2 334 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 LRIT1Q9P2V4 623 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 SEC61A1P61619 476 aaKnown RBP12.69□□□□□ -0.38
NUP98-204ENST00000397004 PON3Q15166 354 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 ODF4Q2M2E3 257 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 MIB2Q96AX9 1013 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 MOGAT1Q96PD6 335 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 TMPRSS13Q9BYE2 586 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 ZNF230Q9UIE0 474 aaPredicted RBP12.69□□□□□ -0.38
NUP98-204ENST00000397004 NUP210LQ5VU65 1888 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 H7C1C5 153 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 TNFSF14O43557 240 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 FGF2P09038 288 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 RAB14P61106 215 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 LCN6P62502 163 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 RPS4XP62701 263 aaKnown RBP12.69□□□□□ -0.38
NUP98-204ENST00000397004 ENPP2Q13822 863 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 LIPNQ5VXI9 398 aa12.69□□□□□ -0.38
NUP98-204ENST00000397004 TMUB2Q71RG4 321 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms