RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 IGHA1P01876 353 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 PRR23D2P0DMB1 279 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 H3F3AP84243 136 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 H1FNTQ75WM6 255 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 SVOPQ8N4V2 548 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 SDR9C7Q8NEX9 313 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 OR4K13Q8NH42 304 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 MIB2Q96AX9 1013 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 TEAD3Q99594 435 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 ASPNQ9BXN1 380 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 CCDC90BQ9GZT6 254 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 CHST11Q9NPF2 352 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 NDUFA13Q9P0J0 144 aa11.42□□□□□ -0.58
TRIM39-204ENST00000396548 WARS2Q9UGM6 360 aaKnown RBP11.42□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF814B7Z6K7 855 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 ADORA3P0DMS8 318 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 HLA-DOBP13765 273 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 GGTLC2Q14390 218 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.41□□□□□ -0.58
TRIM39-204ENST00000396548 KLHL22Q53GT1 634 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 SLC25A25Q6KCM7 469 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 STX19Q8N4C7 294 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 CYB561A3Q8NBI2 242 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF485Q8NCK3 441 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 KCNE4Q8WWG9 221 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 NMNAT3Q96T66 252 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 PIGQQ9BRB3 760 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 INIPQ9NRY2 104 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF99A8MXY4 864 aaPredicted RBP11.41□□□□□ -0.58
TRIM39-204ENST00000396548 PTHP01270 115 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 IFNGP01579 166 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 TCEA1P23193 301 aaKnown RBP11.41□□□□□ -0.58
TRIM39-204ENST00000396548 SLC25A1P53007 311 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 RAC1P63000 192 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 ARMC4Q5T2S8 1044 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 GGNQ86UU5 652 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 LSM14AQ8ND56 463 aaKnown RBP11.41□□□□□ -0.58
TRIM39-204ENST00000396548 ATP6V1C2Q8NEY4 427 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 SNX18Q96RF0 628 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 TIMP4Q99727 224 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 TXNIPQ9H3M7 391 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 CLEC2DQ9UHP7 191 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 BOKQ9UMX3 212 aaPredicted RBP11.41□□□□□ -0.58
TRIM39-204ENST00000396548 B3GALT5Q9Y2C3 310 aa11.41□□□□□ -0.58
TRIM39-204ENST00000396548 SNTNA6NMZ2 147 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 RAB36O95755 333 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 LCKP06239 509 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 GPR139Q6DWJ6 353 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 ASB18Q6ZVZ8 466 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 NANOGP1Q8N7R0 232 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF248Q8NDW4 579 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 C9orf43Q8TAL5 461 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-204ENST00000396548 YIPF6Q96EC8 236 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 ADGRG7Q96K78 797 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 C5orf34Q96MH7 638 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 DOK1Q99704 481 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 TTTY12Q9BZ98 90 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 TMEM185BQ9H7F4 350 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 COMMD3-BMI1R4GMX3 469 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 FREM3P0C091 2139 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 LOC102725191A0A1B0GVB3 256 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 A0A1W2PNR3 127 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 OPN1LWP04000 364 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 DCKP27707 260 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 ETV1P50549 477 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 TNFSF10P50591 281 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 CCL11P51671 97 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 RPL27P61353 136 aaKnown RBP11.4□□□□□ -0.58
TRIM39-204ENST00000396548 PUDPQ08623 228 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 TMEM176BQ3YBM2 270 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-204ENST00000396548 LINC01590Q5TEZ4 76 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 TMPPEQ6ZT21 453 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 GPR141Q7Z602 305 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 ZFP62Q8NB50 900 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-204ENST00000396548 RELTQ969Z4 430 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 SMAD5Q99717 465 aaKnown RBP11.4□□□□□ -0.58
TRIM39-204ENST00000396548 DKK4Q9UBT3 224 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 CSAG2Q9Y5P2 127 aa11.4□□□□□ -0.58
TRIM39-204ENST00000396548 IRGMA1A4Y4 181 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 TRIM64BA6NI03 449 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 AKR7A3O95154 331 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 KLK2P20151 261 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 GSTT1P30711 240 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 TGFBR2P37173 567 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 DIO1P49895 249 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 CLDN15P56746 228 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 ACKR1Q16570 336 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 DEFB109BQ30KR1 87 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 RAET1LQ5VY80 246 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 YRDCQ86U90 279 aaKnown RBP11.4□□□□□ -0.59
TRIM39-204ENST00000396548 ARIH2OSQ8N7S6 290 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 FCGR1BQ92637 280 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 DGCR14Q96DF8 476 aaKnown RBP11.4□□□□□ -0.59
TRIM39-204ENST00000396548 CRELD1Q96HD1 420 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 OR5B2Q96R09 309 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 ADGRL4Q9HBW9 690 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 VSX1Q9NZR4 365 aaPredicted RBP11.4□□□□□ -0.59
TRIM39-204ENST00000396548 GRHPRQ9UBQ7 328 aa11.4□□□□□ -0.59
TRIM39-204ENST00000396548 KLF13Q9Y2Y9 288 aaPredicted RBP11.4□□□□□ -0.59
TRIM39-204ENST00000396548 C11orf98E9PRG8 122 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms