RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ZNF702PQ9H963 129 aa3.73□□□□□ -1.81
HMGB1P10-201ENST00000395823 IL26Q9NPH9 171 aa3.73□□□□□ -1.81
HMGB1P10-201ENST00000395823 SDHAF3Q9NRP4 125 aa3.73□□□□□ -1.81
HMGB1P10-201ENST00000395823 THUMPD1Q9NXG2 353 aaKnown RBP3.73□□□□□ -1.81
HMGB1P10-201ENST00000395823 APOBEC3BQ9UH17 382 aaKnown RBP3.73□□□□□ -1.81
HMGB1P10-201ENST00000395823 COPS3Q9UNS2 423 aa3.73□□□□□ -1.81
HMGB1P10-201ENST00000395823 KCNIP3Q9Y2W7 256 aa3.73□□□□□ -1.81
HMGB1P10-201ENST00000395823 LRRIQ3A6PVS8 624 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 PSMD11O00231 422 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 WWP2O00308 870 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 MBTPS2O43462 519 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 BCL2L11O43521 198 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 DFNA5O60443 496 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 IGHV3-23P01764 117 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 THY1P04216 161 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 CALCRP30988 508 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 MEOX2P50222 304 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 YWHAGP61981 247 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 BCL2L1Q07817 233 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 USF2Q15853 346 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 DGUOKQ16854 277 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 C15orf32Q32M92 178 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 ALKBH6Q3KRA9 238 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 HSP90AA4PQ58FG1 418 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 DEGS2Q6QHC5 323 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 BZW1Q7L1Q6 419 aaKnown RBP3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 GTPBP8Q8N3Z3 284 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 CSGALNACT2Q8N6G5 542 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 ZNF565Q8N9K5 539 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 CCDC12Q8WUD4 166 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 OR1E3Q8WZA6 343 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 FGF11Q92914 225 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 FOXN4Q96NZ1 517 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 CYTH2Q99418 400 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 KIR2DL4Q99706 377 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 TSG101Q99816 390 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 KCNS3Q9BQ31 491 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 MRPL45Q9BRJ2 306 aaKnown RBP3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 LLPHQ9BRT6 129 aaKnown RBP3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 FAIM2Q9BWQ8 316 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 DEFB126Q9BYW3 111 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 NMUR2Q9GZQ4 415 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 Q9H3A6 140 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 LRRC19Q9H756 370 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 IKZF2Q9UKS7 526 aa3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 RPL36Q9Y3U8 105 aaKnown RBP3.72□□□□□ -1.81
HMGB1P10-201ENST00000395823 EVC2Q86UK5 1308 aa3.71□□□□□ -1.81
HMGB1P10-201ENST00000395823 IGHV1OR21-1A0A087WYE8 117 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 IGHV7-81A0A0B4J1V7 117 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 OR5B21A6NL26 309 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 TCP11X1B4DZS4 312 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 HCRTR1O43613 425 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 DNAJB6O75190 326 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 OR7A10O76100 309 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 CCDC166P0CW27 439 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 ZNF43P17038 809 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 MSNP26038 577 aaKnown RBP3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 RRM2P31350 389 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 UGT1A3P35503 534 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 GSSP48637 474 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 SLC11A1P49279 550 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 SCRN3Q0VDG4 424 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 OR5I1Q13606 314 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 PTRHD1Q6GMV3 140 aaKnown RBP3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 UNQ9370/PRO34162Q6UXP9 181 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 TPGS1Q6ZTW0 290 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 VTCN1Q7Z7D3 282 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 CADM2Q8N3J6 435 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 TPRX1Q8N7U7 411 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 SPATA4Q8NEY3 305 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 PIBF1Q8WXW3 757 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 PAGE5Q96GU1 130 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 SEC22AQ96IW7 307 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 TECTBQ96PL2 329 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 PANX1Q96RD7 426 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 CHP1Q99653 195 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 ZNF184Q99676 751 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 CENPHQ9H3R5 247 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 TREM1Q9NP99 234 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 PSMC3IPQ9P2W1 217 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 PEF1Q9UBV8 284 aaKnown RBP3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 KLHL21Q9UJP4 597 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 MOKQ9UQ07 419 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 SBNO1A3KN83 1393 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 PLEKHH1Q9ULM0 1364 aa3.71□□□□□ -1.82
HMGB1P10-201ENST00000395823 NISCHQ9Y2I1 1504 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 A0A0J9YYE9 177 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 UGT1A9O60656 530 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 LYPLA1O75608 230 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 IGHV3-48P01763 117 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 TRBC1P01850 177 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 SEMG1P04279 462 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 CRYGCP07315 174 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 MCF2P10911 925 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 MSR1P21757 451 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 SHMT2P34897 504 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 FDFT1P37268 417 aa3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 CCNHP51946 323 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 KPNA2P52292 529 aaKnown RBP3.7□□□□□ -1.82
HMGB1P10-201ENST00000395823 PLK1P53350 603 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms