RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 AKIRIN2Q53H80 203 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF619Q8N2I2 560 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 BADQ92934 168 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF578Q96N58 590 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-203ENST00000395060 DPYSL5Q9BPU6 564 aa13.11□□□□□ -0.31
CLIP2-203ENST00000395060 TMEM272A0A1B0GTI8 110 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 SLC31A1O15431 190 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 P2RX6O15547 441 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 RBBP9O75884 186 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 SLC6A6P31641 620 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 CENPAP49450 140 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 CCR4P51679 360 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 ACTC1P68032 377 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 ACTA1P68133 377 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 TAF13Q15543 124 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 ZIC1Q15915 447 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 SCGB2B2Q4G0G5 96 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 EIPR1Q53HC9 387 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 TMEM185AQ8NFB2 350 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 RSPRY1Q96DX4 576 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 LDAHQ9H6V9 325 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 ASCC3Q8N3C0 2202 aaKnown RBP13.1□□□□□ -0.31
CLIP2-203ENST00000395060 A0A1W2PP55 124 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 GPR31O00270 319 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 NDUFB6O95139 128 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 DLX5P56178 289 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 LTBQ06643 244 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 ELAVL3Q14576 367 aaKnown RBP13.1□□□□□ -0.31
CLIP2-203ENST00000395060 ARHGAP11BQ3KRB8 267 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 PRRT3Q5FWE3 981 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 STAC2Q6ZMT1 411 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 VN1R4Q7Z5H5 301 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 FAM71CQ8NEG0 241 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 OR2AK2Q8NG84 335 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 LCN9Q8WX39 176 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 SUSD6Q92537 303 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 MOAP1Q96BY2 351 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 JAM3Q9BX67 310 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 SLC6A17Q9H1V8 727 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 WDR13Q9H1Z4 485 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 SYNDIG1Q9H7V2 258 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 INPP5EQ9NRR6 644 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 AKAP7Q9P0M2 348 aaPredicted RBP13.1□□□□□ -0.31
CLIP2-203ENST00000395060 CDV3Q9UKY7 258 aaKnown RBP13.1□□□□□ -0.31
CLIP2-203ENST00000395060 KLHDC2Q9Y2U9 406 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 LAMA1P25391 3075 aa13.1□□□□□ -0.31
CLIP2-203ENST00000395060 FGF17O60258 216 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 F13BP05160 661 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 CISD3P0C7P0 127 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 MAT1AQ00266 395 aaKnown RBP13.09□□□□□ -0.31
CLIP2-203ENST00000395060 DUSP8Q13202 625 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 CLVS2Q5SYC1 327 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 RPL22L1Q6P5R6 122 aaKnown RBP13.09□□□□□ -0.31
CLIP2-203ENST00000395060 LEG1Q6P5S2 330 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 ZFP82Q8N141 532 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 BPIFCQ8NFQ6 507 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 C2CD4CQ8TF44 421 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 NKD1Q969G9 470 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 PPP1R14AQ96A00 147 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF471Q9BX82 626 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-203ENST00000395060 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 NUP210Q8TEM1 1887 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-203ENST00000395060 OBSL1O75147 1896 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 TRIOO75962 3097 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 TBC1D3KA0A087X1G2 549 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 TBC1D3FA6NER0 549 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-203ENST00000395060 DNASE2O00115 360 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-203ENST00000395060 OGG1O15527 345 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 FGF2P09038 288 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 NKPD1Q17RQ9 610 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 TBC1D3GQ6DHY5 549 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 UNQ6126/PRO20091Q6UXV3 157 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 OVCH1Q7RTY7 1134 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 OVCH2Q7RTZ1 564 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF546Q86UE3 836 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 TTLQ8NG68 377 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 NR4A3Q92570 626 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 C10orf90Q96M02 699 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 PDCD10Q9BUL8 212 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 PBX4Q9BYU1 374 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 SLC39A1Q9NY26 324 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 DEC1Q9P2X7 70 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 RNF215Q9Y6U7 377 aa13.09□□□□□ -0.31
CLIP2-203ENST00000395060 ACOT7O00154 380 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 CTNSO60931 367 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 LYPD3O95274 346 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 DBIP07108 87 aaKnown RBP13.08□□□□□ -0.31
CLIP2-203ENST00000395060 OR2T7P0C7T2 308 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 MST1P26927 711 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 DPTQ07507 201 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 IRF4Q15306 451 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 LRRC69Q6ZNQ3 347 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 CBLN2Q8IUK8 224 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 CDH26Q8IXH8 852 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 LINC00518Q8N0U6 118 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 PXT1Q8NFP0 134 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 OR2T27Q8NH04 317 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 CCL4L1Q8NHW4 92 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms