RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ZNF440Q8IYI8 595 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 CDK20Q8IZL9 346 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 LRRC17Q8N6Y2 441 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 CLDN22Q8N7P3 220 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 DUSP18Q8NEJ0 188 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 DEFB124Q8NES8 71 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 OR5L2Q8NGL0 311 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 OR4Q3Q8NH05 313 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 ZNF563Q8TA94 476 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 NUBPLQ8TB37 319 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 DUSP19Q8WTR2 217 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 CT55Q8WUE5 264 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 DNAJA4Q8WW22 397 aaPredicted RBP6.31□□□□□ -1.4
RTN4-205ENST00000394609 ASB15Q8WXK1 588 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 GGHQ92820 318 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 OSTF1Q92882 214 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 C3orf49Q96BT1 292 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 DNAJA3Q96EY1 480 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 LIN37Q96GY3 246 aaPredicted RBP6.31□□□□□ -1.4
RTN4-205ENST00000394609 COQ7Q99807 217 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 SRRQ9GZT4 340 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 EVA1AQ9H8M9 152 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 RNF121Q9H920 327 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 GALNT9Q9HCQ5 603 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 KRCC1Q9NPI7 259 aaPredicted RBP6.31□□□□□ -1.4
RTN4-205ENST00000394609 ING3Q9NXR8 418 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 MYOTQ9UBF9 498 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 EIF3KQ9UBQ5 218 aaKnown RBP6.31□□□□□ -1.4
RTN4-205ENST00000394609 V9GYH0 126 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 KMT2EQ8IZD2 1858 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 RALGAPA1Q6GYQ0 2036 aa6.31□□□□□ -1.4
RTN4-205ENST00000394609 CNOT1A5YKK6 2376 aaKnown RBP6.3□□□□□ -1.4
RTN4-205ENST00000394609 A0A087WUJ7 227 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 LOC102723996A0A087X1L8 192 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SPAARA0A1B0GVQ0 90 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 A0A1W2PQ72 361 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SNAPC5O75971 98 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SLC2A10O95528 541 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 STSP08842 583 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 GAAP10253 952 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 COX6A1P12074 109 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 MYL9P24844 172 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OTX2P32243 289 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 RBM34P42696 430 aaKnown RBP6.3□□□□□ -1.4
RTN4-205ENST00000394609 FXYD6P3P58550 94 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SNRPGP62308 76 aaKnown RBP6.3□□□□□ -1.4
RTN4-205ENST00000394609 PSPHP78330 225 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ST3GAL4Q11206 333 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 RIN1Q13671 783 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 TAB1Q15750 504 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 GLYR1Q49A26 553 aaPredicted RBP6.3□□□□□ -1.4
RTN4-205ENST00000394609 FCRLBQ6BAA4 426 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 WBP2NLQ6ICG8 309 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 TMPRSS11FQ6ZWK6 438 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SPATC1Q76KD6 591 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.3□□□□□ -1.4
RTN4-205ENST00000394609 PIP4P1Q86T03 277 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OAFQ86UD1 273 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ATCAYQ86WG3 371 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OR8H2Q8N162 312 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 CYP4Z2PQ8N1L4 340 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OR11G2Q8NGC1 345 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OR8J1Q8NGP2 316 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OR5H6Q8NGV6 325 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 FANK1Q8TC84 345 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 LRR1Q96L50 414 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 IMMP1LQ96LU5 166 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 HYLS1Q96M11 299 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 HS6ST2Q96MM7 605 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 TNFRSF13CQ96RJ3 184 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 LRFN3Q9BTN0 628 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 MED18Q9BUE0 208 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ZNF426Q9BUY5 554 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 DDA1Q9BW61 102 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 LAT2Q9GZY6 243 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 OR52D1Q9H346 318 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 UBQLN3Q9H347 655 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 LIN7BQ9HAP6 207 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ZNF160Q9HCG1 818 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 HHATLQ9HCP6 504 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 EXOSC3Q9NQT5 275 aaKnown RBP6.3□□□□□ -1.4
RTN4-205ENST00000394609 TCFL5Q9UL49 500 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.3□□□□□ -1.4
RTN4-205ENST00000394609 PCDHGA1Q9Y5H4 931 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 CDH10Q9Y6N8 788 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 FREM2Q5SZK8 3169 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 PCNX2A6NKB5 2137 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 IGKV1D-42A0A075B6H8 117 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 CCDC187A0A096LP49 1063 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 NSG1A0A0A6YYJ2 146 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 A0A0G2JMP0 313 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 B4DXG7 233 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ZNF670-ZNF695F2Z2N8 137 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 CDC40O60508 579 aaKnown RBP eCLIP6.3□□□□□ -1.4
RTN4-205ENST00000394609 TNFSF15O95150 251 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 APOL3O95236 402 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 IL1AP01583 271 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 SCG5P05408 212 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 ADRA2AP08913 450 aa6.3□□□□□ -1.4
RTN4-205ENST00000394609 IL32P24001 234 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms