RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 DMXL1Q9Y485 3027 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 PTPRZ1P23471 2315 aaPredicted RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 A0A1W2PNR3 127 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 A0A1W2PPW3 197 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 DAPL1A0PJW8 107 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 C12orf71A8MTZ7 269 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 FAM171A2A8MVW0 826 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 FTCDNL1E5RQL4 147 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 H7C1C5 153 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 ARHGEF9O43307 516 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 DXOO77932 396 aaKnown RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 RENP00797 406 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 TSPAN19P0C672 248 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 IMPDH2P12268 514 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 APEHP13798 732 aaKnown RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 SPI1P17947 270 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 PAX7P23759 505 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 ADH6P28332 368 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 ACVR1BP36896 505 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 CD96P40200 585 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 RGS6P49758 472 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 CLK1P49759 484 aaKnown RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 WNT4P56705 351 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 OR2B6P58173 313 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 LCN6P62502 163 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 TLE3Q04726 772 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 MYBPHQ13203 477 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 TMEM176BQ3YBM2 270 aaPredicted RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 EMC4Q5J8M3 183 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 GPR139Q6DWJ6 353 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 H1FNTQ75WM6 255 aaPredicted RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 FAM122BQ7Z309 247 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 KLHL36Q8N4N3 616 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 TMEM99Q8N816 258 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 OR6K6Q8NGW6 343 aa7.79□□□□□ -1.16
TDP1-203ENST00000393454 SMAP2Q8WU79 429 aaPredicted RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 KISS1RQ969F8 398 aaPredicted RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 UBL7Q96S82 380 aaPredicted RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 SRA1Q9HD15 236 aaKnown RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 CDV3Q9UKY7 258 aaKnown RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 LSM2Q9Y333 95 aaKnown RBP7.79□□□□□ -1.16
TDP1-203ENST00000393454 CEP250Q9BV73 2442 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 MED13Q9UHV7 2174 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 LOC100506127A0A0U1RQW1 187 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 A0A1W2PRG6 482 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 TMEM129A0AVI4 362 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 LIPT2A6NK58 231 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 CCRL2O00421 344 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 SLC30A4O14863 429 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 NKX2-8O15522 239 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 AIREO43918 545 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 TRIM3O75382 744 aaPredicted RBP7.78□□□□□ -1.16
TDP1-203ENST00000393454 TRAPPC6AO75865 159 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 AKR7A3O95154 331 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 GABARAPO95166 117 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 TXNDC12O95881 172 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 SBK2P0C263 348 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 LIMS3P0CW19 117 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 LIMS4P0CW20 117 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 GADD45AP24522 165 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 PYCR1P32322 319 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 CD79BP40259 229 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 PEX19P40855 299 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 VBP1P61758 197 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 PUDPQ08623 228 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 SELENBP1Q13228 472 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 SRSF6Q13247 344 aaKnown RBP7.78□□□□□ -1.16
TDP1-203ENST00000393454 ACKR1Q16570 336 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 CTF1Q16619 201 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 MESTQ5EB52 335 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 TUBA3EQ6PEY2 450 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 ZNF227Q86WZ6 799 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 GTPBP8Q8N3Z3 284 aaPredicted RBP7.78□□□□□ -1.16
TDP1-203ENST00000393454 GALNT16Q8N428 558 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 ACBD7Q8N6N7 88 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 SCAIQ8N9R8 606 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 SLC25A43Q8WUT9 341 aaPredicted RBP7.78□□□□□ -1.16
TDP1-203ENST00000393454 SMPDL3BQ92485 455 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 RPL3LQ92901 407 aaKnown RBP7.78□□□□□ -1.16
TDP1-203ENST00000393454 NXPE2Q96DL1 559 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 OPALINQ96PE5 141 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 RACGAP1Q9H0H5 632 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 ADGRL4Q9HBW9 690 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 CHST11Q9NPF2 352 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 ERVK13-1Q9NX77 482 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 ALKBH4Q9NXW9 302 aa7.78□□□□□ -1.16
TDP1-203ENST00000393454 PNMA8CA0A1B0GUJ8 204 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 OR2M5A3KFT3 312 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 MS4A18H0YCH9 400 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 WDPCPO95876 746 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 IGHA1P01876 353 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 SCG5P05408 212 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 CNR1P21554 472 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 SHC1P29353 583 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 NAA10P41227 235 aaPredicted RBP7.77□□□□□ -1.17
TDP1-203ENST00000393454 CENPAP49450 140 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 DIO1P49895 249 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 RRADP55042 308 aa7.77□□□□□ -1.17
TDP1-203ENST00000393454 RPL27P61353 136 aaKnown RBP7.77□□□□□ -1.17
TDP1-203ENST00000393454 C19orf57Q0VDD7 668 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms