RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 FBXO24O75426 580 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 SOX18P35713 384 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 MMP21Q8N119 569 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 FIBINQ8TAL6 211 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 ZFP90Q8TF47 636 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 TSLPQ969D9 159 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 NSUN5Q96P11 429 aaKnown RBP13.74□□□□□ -0.21
CCDC50-201ENST00000392455 CCNL2Q96S94 520 aaPredicted RBP13.74□□□□□ -0.21
CCDC50-201ENST00000392455 ANKRD60Q9BZ19 345 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 OSGIN2Q9Y236 505 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 LAMTOR5O43504 91 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 APH1BQ8WW43 257 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 SCAMP4Q969E2 229 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 WDR61Q9GZS3 305 aaKnown RBP13.74□□□□□ -0.21
CCDC50-201ENST00000392455 TPPP2P59282 170 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 NADSYN1Q6IA69 706 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 TMEM130Q8N3G9 435 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 ZNF566Q969W8 418 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 ZFC3H1O60293 1989 aaKnown RBP13.74□□□□□ -0.21
CCDC50-201ENST00000392455 SLC9B1P1A6NJY1 282 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 SELENOWP63302 87 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 PODNL1Q6PEZ8 512 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 PDZD3Q86UT5 571 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 OR4K5Q8NGD3 323 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 FBXO34Q9NWN3 711 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 RALGAPA1Q6GYQ0 2036 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 PTBP3O95758 552 aaKnown RBP13.74□□□□□ -0.21
CCDC50-201ENST00000392455 HCCSP53701 268 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 GLIS1Q8NBF1 620 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 COPS3Q9UNS2 423 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 TMEM221A6NGB7 291 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 M0R143 59 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 PPP1R3DO95685 299 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 LALBAP00709 142 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 SERPINA2P20848 420 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 GPR18Q14330 331 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 OR10J5Q8NHC4 309 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 S1PR3Q99500 378 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 ZDHHC7Q9NXF8 308 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 ABOP16442 354 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 ADRA2CP18825 462 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 KIR2DS3Q14952 304 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 PQLC3Q8N755 202 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 HUS1BQ8NHY5 278 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 SAT2Q96F10 170 aaPredicted RBP13.74□□□□□ -0.21
CCDC50-201ENST00000392455 TECTBQ96PL2 329 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 SLC12A9Q9BXP2 914 aa13.74□□□□□ -0.21
CCDC50-201ENST00000392455 PCDHGA9Q9Y5G4 932 aaKnown RBP13.74□□□□□ -0.21
CCDC50-201ENST00000392455 DOPEY2Q9Y3R5 2298 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 NAGAP17050 411 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 ZNF628Q5EBL2 1059 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 GAB2Q9UQC2 676 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 PDGFBP01127 241 aaPredicted RBP13.73□□□□□ -0.21
CCDC50-201ENST00000392455 HOXB5P09067 269 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 RPS26P62854 115 aaKnown RBP13.73□□□□□ -0.21
CCDC50-201ENST00000392455 DESI1Q6ICB0 168 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 JAM3Q9BX67 310 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 BTNL2Q9UIR0 455 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 CER1O95813 267 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 S100A11P31949 105 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 MTCP1P56278 107 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 OPN5Q6U736 354 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 RETREG3Q86VR2 466 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 MOCOSQ96EN8 888 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 APOBEC3BQ9UH17 382 aaKnown RBP13.73□□□□□ -0.21
CCDC50-201ENST00000392455 ANKUB1A6NFN9 424 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 DEDDO75618 318 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 GLAP06280 429 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 EIF1P41567 113 aaKnown RBP13.73□□□□□ -0.21
CCDC50-201ENST00000392455 NRMQ8IXM6 262 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 NUDT22Q9BRQ3 303 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 ACTR3CQ9C0K3 210 aaPredicted RBP13.73□□□□□ -0.21
CCDC50-201ENST00000392455 ZBTB20Q9HC78 741 aaPredicted RBP13.73□□□□□ -0.21
CCDC50-201ENST00000392455 PCDHGA1Q9Y5H4 931 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 HEPACAM2A8MVW5 462 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 EIF1BO60739 113 aaKnown RBP13.73□□□□□ -0.21
CCDC50-201ENST00000392455 CNR2P34972 360 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 ADGRG5Q8IZF4 528 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 C14orf79Q96F83 325 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 DPH7Q9BTV6 452 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 VAMP8Q9BV40 100 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 PTGDR2Q9Y5Y4 395 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 A0A1W2PQU0 124 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 AQP9O43315 295 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 SLC22A24Q8N4F4 322 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 ZNF583Q96ND8 569 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 SLC46A1Q96NT5 459 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 TAF9BQ9HBM6 251 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 RIMS3Q9UJD0 308 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 GABRQQ9UN88 632 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 SCN2AQ99250 2005 aa13.73□□□□□ -0.21
CCDC50-201ENST00000392455 PIRO00625 290 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 UBL3O95164 117 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 TMEM183BQ1AE95 376 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 OTUD1Q5VV17 481 aaPredicted RBP13.72□□□□□ -0.21
CCDC50-201ENST00000392455 NLGN4YQ8NFZ3 816 aaPredicted RBP13.72□□□□□ -0.21
CCDC50-201ENST00000392455 IFI44Q8TCB0 444 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 PEX11GQ96HA9 241 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 OR51I2Q9H344 312 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms