RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 NUDT19A8MXV4 375 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 PLSCR1O15162 318 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 CD70P32970 193 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 AADACL3Q5VUY0 350 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 RDH10Q8IZV5 341 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 PHRF1Q9P1Y6 1649 aaKnown RBP15.01□□□□□ -0.01
SHANK1-204ENST00000391814 PHF1O43189 567 aaPredicted RBP15.01□□□□□ -0.01
SHANK1-204ENST00000391814 NFYBP25208 207 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 CD80P33681 288 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 SLC10A1Q14973 349 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 PDLIM3Q53GG5 364 aaPredicted RBP15.01□□□□□ -0.01
SHANK1-204ENST00000391814 MBOAT2Q6ZWT7 520 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 GCDHQ92947 438 aaPredicted RBP15.01□□□□□ -0.01
SHANK1-204ENST00000391814 SMIM14Q96QK8 99 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 NENFQ9UMX5 172 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 ARL2-SNX15V9GYD0 113 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 LOC100289279A0A1B0GTE1 492 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 ZC3H12DA2A288 527 aaKnown RBP15.01□□□□□ -0.01
SHANK1-204ENST00000391814 PTBP3O95758 552 aaKnown RBP15.01□□□□□ -0.01
SHANK1-204ENST00000391814 IAH1Q2TAA2 248 aaPredicted RBP15.01□□□□□ -0.01
SHANK1-204ENST00000391814 OR52I2Q8NH67 350 aa15.01□□□□□ -0.01
SHANK1-204ENST00000391814 SELENOFO60613 162 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 HOXA1P49639 335 aaPredicted RBP15□□□□□ -0.01
SHANK1-204ENST00000391814 CARD18P57730 90 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 MPEG1Q2M385 716 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 ESPNLQ6ZVH7 1005 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 ALOXE3Q9BYJ1 711 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 ZNF724A8MTY0 619 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 BCKDHBP21953 392 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 MRPL21Q7Z2W9 205 aaKnown RBP15□□□□□ -0.01
SHANK1-204ENST00000391814 SERINC5Q86VE9 423 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 ZNF561Q8N587 486 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 CHST14Q8NCH0 376 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 SLC38A5Q8WUX1 472 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 PLK3Q9H4B4 646 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 CHST2Q9Y4C5 530 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 A0A087WV62 115 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 F6UZH7 168 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 NAGAP17050 411 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 GPM6BQ13491 265 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 SNTB1Q13884 538 aaKnown RBP15□□□□□ -0.01
SHANK1-204ENST00000391814 TAF9Q16594 264 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 ANKRD34AQ69YU3 496 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 RTP3Q9BQQ7 232 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 PTDSS2Q9BVG9 487 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 VDAC3Q9Y277 283 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 DCCP43146 1447 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 CALCRP30988 508 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 ZNF761Q86XN6 746 aaPredicted RBP15□□□□□ -0.01
SHANK1-204ENST00000391814 LRRC18Q8N456 261 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 ITGB8P26012 769 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 SLC6A8P48029 635 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 KIAA0907Q7Z7F0 614 aaPredicted RBP15□□□□□ -0.01
SHANK1-204ENST00000391814 ACOT4Q8N9L9 421 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 INTS12Q96CB8 462 aaKnown RBP15□□□□□ -0.01
SHANK1-204ENST00000391814 TOLLIPQ9H0E2 274 aa15□□□□□ -0.01
SHANK1-204ENST00000391814 MED1Q15648 1581 aaPredicted RBP15□□□□□ -0.01
SHANK1-204ENST00000391814 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.99□□□□□ -0.01
SHANK1-204ENST00000391814 TMEM200CA6NKL6 621 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 GFRA2O00451 464 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 OPN1LWP04000 364 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 IGFBP1P08833 259 aaPredicted RBP14.99□□□□□ -0.01
SHANK1-204ENST00000391814 ZNF728P0DKX0 622 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 ADRA1AP35348 466 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 ZNF266Q14584 549 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 MRPL2Q5T653 305 aaKnown RBP14.99□□□□□ -0.01
SHANK1-204ENST00000391814 ZBTB37Q5TC79 503 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 NUDT8Q8WV74 236 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 UCN3Q969E3 161 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 AK3Q9UIJ7 227 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 MRPS28Q9Y2Q9 187 aaKnown RBP14.99□□□□□ -0.01
SHANK1-204ENST00000391814 A6NCN8 305 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 MRPL19P49406 292 aaKnown RBP14.99□□□□□ -0.01
SHANK1-204ENST00000391814 THBS3P49746 956 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 ELLP55199 621 aaPredicted RBP14.99□□□□□ -0.01
SHANK1-204ENST00000391814 Q499Y3 187 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 YOD1Q5VVQ6 348 aaPredicted RBP14.99□□□□□ -0.01
SHANK1-204ENST00000391814 Q6ZTK2 550 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 C15orf54Q8N8G6 183 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 ZFP62Q8NB50 900 aaPredicted RBP14.99□□□□□ -0.01
SHANK1-204ENST00000391814 PLPP7Q8NBV4 271 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 C12orf10Q9HB07 376 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 TRHRP34981 398 aaPredicted RBP14.99□□□□□ -0.01
SHANK1-204ENST00000391814 NPBWR1P48145 328 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 AQP6Q13520 282 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 RHOUQ7L0Q8 258 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 TCTE3Q8IZS6 198 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 OR9A4Q8NGU2 314 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 DIO2Q92813 273 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 DEFB126Q9BYW3 111 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 METTL9Q9H1A3 318 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 NDUFB11Q9NX14 153 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 NUP188Q5SRE5 1749 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 HRO43593 1189 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 OR2F2O95006 317 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 OR2T7P0C7T2 308 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 CD79AP11912 226 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 CCR7P32248 378 aa14.99□□□□□ -0.01
SHANK1-204ENST00000391814 TSFMP43897 325 aaKnown RBP14.99□□□□□ -0.01
SHANK1-204ENST00000391814 OR2F1Q13607 317 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms