RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TMEM179BQ7Z7N9 219 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 KDM8Q8N371 416 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 TMEM156Q8N614 296 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 OR2A12Q8NGT7 310 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 OR4K15Q8NH41 348 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 TBC1D20Q96BZ9 403 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 SMIM14Q96QK8 99 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 NIPSNAP3BQ9BS92 247 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 CPNE7Q9UBL6 633 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 LHX3Q9UBR4 397 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 PPT2Q9UMR5 302 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 SRMP19623 302 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 IMPA1P29218 277 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 DAP3P51398 398 aaKnown RBP18.25■□□□□ 0.51
SHANK1-203ENST00000391813 ZNF136P52737 540 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 C1orf61Q13536 156 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 ZNF425Q6IV72 752 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 PDXPQ96GD0 296 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 SCN9AQ15858 1988 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 TP53I11O14683 189 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 SERPINE2P07093 398 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 RAB4BP61018 213 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 BAMBIQ13145 260 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 ACOT7LQ6ZUV0 252 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 HSD11B1LQ7Z5J1 315 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 RHBDD3Q9Y3P4 386 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 MYO5AQ9Y4I1 1855 aaKnown RBP18.25■□□□□ 0.51
SHANK1-203ENST00000391813 PRICKLE3O43900 615 aaPredicted RBP18.25■□□□□ 0.51
SHANK1-203ENST00000391813 SLC14A1Q13336 389 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 OR1S1Q8NH92 325 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 STEAP1Q9UHE8 339 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 A0A087WZY1 265 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 TRIM77I1YAP6 450 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 SPOCK1Q08629 439 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 TMEM41BQ5BJD5 291 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 SLC16A12Q6ZSM3 486 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 ALG12Q9BV10 488 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 CWH43Q9H720 699 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 TNFRSF12AQ9NP84 129 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 BCORQ6W2J9 1755 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 GAB1Q13480 694 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 MDGA2Q7Z553 956 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 LKAAEAR1Q8TD35 194 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 PHF7Q9BWX1 381 aaPredicted RBP18.24■□□□□ 0.51
SHANK1-203ENST00000391813 TMEM100Q9NV29 134 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 EHFQ9NZC4 300 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 ANXA7P20073 488 aaKnown RBP18.24■□□□□ 0.51
SHANK1-203ENST00000391813 NDUFA6P56556 154 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 EBPQ15125 230 aaKnown RBP18.24■□□□□ 0.51
SHANK1-203ENST00000391813 MRPL2Q5T653 305 aaKnown RBP18.24■□□□□ 0.51
SHANK1-203ENST00000391813 ST8SIA2Q92186 375 aa18.24■□□□□ 0.51
SHANK1-203ENST00000391813 TTLL8A6PVC2 850 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 HOXB9P17482 250 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-203ENST00000391813 CTHP32929 405 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 FAM71E1Q6IPT2 247 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 HSBP1L1C9JCN9 74 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 MFGE8Q08431 387 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-203ENST00000391813 MIB2Q96AX9 1013 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 TMEM269A0A1B0GVZ9 245 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 GPR171O14626 319 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 TMEM127O75204 238 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 CPT2P23786 658 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 DGCR2P98153 550 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 MPEG1Q2M385 716 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 P4HA3Q7Z4N8 544 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 LIX1LQ8IVB5 337 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 SAMD10Q9BYL1 202 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 KLHL13Q9P2N7 655 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 PLPP5Q8NEB5 264 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 OR52I2Q8NH67 350 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 FAM71F1Q96KD3 344 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-203ENST00000391813 IKZF5Q9H5V7 419 aa18.23■□□□□ 0.51
SHANK1-203ENST00000391813 C17orf113A0A1B0GUU1 675 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 TMEM72A0PK05 275 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 TLE4Q04727 773 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 MLF2Q15773 248 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-203ENST00000391813 CDH26Q8IXH8 852 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 KIAA1958Q8N8K9 716 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 OR56B1Q8NGI3 324 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 OCSTAMPQ9BR26 566 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 SCPEP1Q9HB40 452 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 MGMTP16455 207 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 TEAD1P28347 426 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 CDK3Q00526 305 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 PRDX1Q06830 199 aaKnown RBP18.22■□□□□ 0.51
SHANK1-203ENST00000391813 WBP2NLQ6ICG8 309 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 PRSS45Q7RTY3 260 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 DTD2Q96FN9 168 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 UBE2ZQ9H832 354 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-203ENST00000391813 CXXC1Q9P0U4 656 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-203ENST00000391813 TMEFF2Q9UIK5 374 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-203ENST00000391813 HBQ1P09105 142 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 LIPIQ6XZB0 460 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 DEFB123Q8N688 67 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 MR1Q95460 341 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 ENTPD2Q9Y5L3 495 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 GJB3O75712 270 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 MT-CO2P00403 227 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 SBK2P0C263 348 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 SLC35D3Q5M8T2 416 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms