RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 PHF3Q92576 2039 aaKnown RBP3.19□□□□□ -1.9
SNORA40.4-201ENST00000390971 COL1A2P08123 1366 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 MBLAC1A4D2B0 266 aaPredicted RBP3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 H3BNH8 94 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 XKRYO14609 159 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 POLR2DO15514 142 aaKnown RBP3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 B4GALT5O43286 388 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 ATP5LO75964 103 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 ALDOBP05062 364 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 ZNF286BP0CG31 522 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 PAX7P23759 505 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 HMGB2P26583 209 aaKnown RBP3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 GNA11P29992 359 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 GSSP48637 474 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 ERVK-25P63136 954 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 REG3AQ06141 175 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 SGCAQ16586 387 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 GUCA2BQ16661 112 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 LY6G6FQ5SQ64 297 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 LCN12Q6JVE5 192 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 C1orf94Q6P1W5 598 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 C19orf35Q6ZS72 473 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 PLA2G4DQ86XP0 818 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 ANKFN1Q8N957 763 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 VN1R2Q8NFZ6 395 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 OR52H1Q8NGJ2 320 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 TRMT10AQ8TBZ6 339 aaKnown RBP3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 ACTRT1Q8TDG2 376 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 CD300LFQ8TDQ1 290 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 BMFQ96LC9 184 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 SENP8Q96LD8 212 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 OXGR1Q96P68 337 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 CLCC1Q96S66 551 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 RIBC2Q9H4K1 309 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 GIN1Q9NXP7 522 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 ZNF835Q9Y2P0 537 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 POLDIP2Q9Y2S7 368 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 MEMO1Q9Y316 297 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 YTHDF2Q9Y5A9 579 aaKnown RBP3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 TIMM10BQ9Y5J6 103 aa3.18□□□□□ -1.9
SNORA40.4-201ENST00000390971 LRP4O75096 1905 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 RPAP1Q9BWH6 1393 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 PLAC8L1A1L4L8 177 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 PRRG1O14668 218 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 CD5LO43866 347 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 B3GALNT1O75752 331 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 CD5P06127 495 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 CISD3P0C7P0 127 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 ZDHHC11BP0C7U3 371 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 OMGP23515 440 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 CASP4P49662 377 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 PDIA2Q13087 525 aaKnown RBP3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 PDK4Q16654 411 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 DUSP7Q16829 419 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 TTC23Q5W5X9 447 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 NANOGP8Q6NSW7 305 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 ZSCAN25Q6NSZ9 544 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 LYPD2Q6UXB3 125 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 THOC6Q86W42 341 aaKnown RBP3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 FAM86B1Q8N7N1 296 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 AURKBQ96GD4 344 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 NDFIP1Q9BT67 221 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 PALMDQ9NP74 551 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 CTPS2Q9NRF8 586 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 SLC35D1Q9NTN3 355 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 CALYQ9NYX4 217 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 XCL2Q9UBD3 114 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 OPN4Q9UHM6 478 aa3.17□□□□□ -1.9
SNORA40.4-201ENST00000390971 IGKV1D-17A0A075B6S4 117 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 CSF3P09919 207 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 RHOXF2BP0C7M4 288 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 GKN3PP0CG01 181 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 CNR1P21554 472 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 CD86P42081 329 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 QARSP47897 775 aaKnown RBP3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 FZD2Q14332 565 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 NADK2Q4G0N4 442 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 ABCA11PQ4W5N1 156 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 DMRTC1Q5HYR2 192 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 TMEM123Q8N131 208 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 ZNF615Q8N8J6 731 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 FAM133AQ8N9E0 248 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 ACOT4Q8N9L9 421 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 IPMKQ8NFU5 416 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 DNAJC19Q96DA6 116 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 ZNF578Q96N58 590 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 ZDHHC4Q9NPG8 344 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 UFSP2Q9NUQ7 469 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 HPF1Q9NWY4 346 aa3.16□□□□□ -1.9
SNORA40.4-201ENST00000390971 K7EPI3 171 aa3.15□□□□□ -1.91
SNORA40.4-201ENST00000390971 XPO1O14980 1071 aaKnown RBP3.15□□□□□ -1.91
SNORA40.4-201ENST00000390971 MED7O43513 233 aa3.15□□□□□ -1.91
SNORA40.4-201ENST00000390971 ENTPD5O75356 428 aa3.15□□□□□ -1.91
SNORA40.4-201ENST00000390971 DIRAS1O95057 198 aa3.15□□□□□ -1.91
SNORA40.4-201ENST00000390971 BGLAPP02818 100 aa3.15□□□□□ -1.91
SNORA40.4-201ENST00000390971 SMIM10L1P0DMW3 83 aa3.15□□□□□ -1.91
SNORA40.4-201ENST00000390971 IGHV3-43DP0DP04 118 aa3.15□□□□□ -1.91
SNORA40.4-201ENST00000390971 CRYBB1P53674 252 aaPredicted RBP3.15□□□□□ -1.91
SNORA40.4-201ENST00000390971 BPIFB3P59826 476 aa3.15□□□□□ -1.91
SNORA40.4-201ENST00000390971 ACVR1Q04771 509 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms