RNA–Protein interactions for RNA: ENST00000390617.2

IGHV3-35-201, Transcript of immunoglobulin heavy variable 3-35 (non-functional), humanhuman

APPRIS P1 BASIC

Gene IGHV3-35, Length 366 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-35-201ENST00000390617 M0QX08 132 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 NDUFS8O00217 210 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 KRT33AO76009 404 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 VAMP5O95183 116 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 ZNF16P17020 682 aaPredicted RBP13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 THBS2P35442 1172 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 MDH1P40925 334 aaKnown RBP13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 IL1RL1Q01638 556 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 RBBP4Q09028 425 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 KLF10Q13118 480 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 SELPLGQ14242 412 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 ADRM1Q16186 407 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 MST1LQ2TV78 715 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 GLIPR1L2Q4G1C9 344 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 STK35Q8TDR2 534 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 DNAJA4Q8WW22 397 aaPredicted RBP13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 ZNF317Q96PQ6 595 aaPredicted RBP13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 SHARPINQ9H0F6 387 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 SAR1AQ9NR31 198 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 MOKQ9UQ07 419 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 FKBP7Q9Y680 259 aa13.17□□□□□ -0.3
IGHV3-35-201ENST00000390617 A0A1B0GWA3 101 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 OR6C65A6NJZ3 312 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 MRASO14807 208 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 ATP8B1O43520 1251 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 LY6HO94772 140 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 PNMTP11086 282 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 RPS5P46782 204 aaKnown RBP13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 GZMKP49863 264 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 PDLIM4P50479 330 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 P2RY4P51582 365 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 SNRPD2P62316 118 aaKnown RBP13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 TRMT5Q32P41 509 aaKnown RBP13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 HIKESHIQ53FT3 197 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 ALG10BQ5I7T1 473 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 INTS11Q5TA45 600 aaKnown RBP13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 RANBP3LQ86VV4 465 aaPredicted RBP13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 SNX32Q86XE0 403 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 SLC30A8Q8IWU4 369 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 PCYOX1LQ8NBM8 494 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 LRRC58Q96CX6 371 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 FBXO17Q96EF6 278 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 SLC38A2Q96QD8 506 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 PIMREGQ9BSJ6 248 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 KATNB1Q9BVA0 655 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 MYOZ1Q9NP98 299 aaPredicted RBP13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 GID8Q9NWU2 228 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 KLHL14Q9P2G3 628 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 CAPN7Q9Y6W3 813 aa13.16□□□□□ -0.3
IGHV3-35-201ENST00000390617 IGHV1-18A0A0C4DH31 117 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 ZNF587BE7ETH6 402 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 FBP2O00757 339 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 LMX1BO60663 402 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 PDE5AO76074 875 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 MFN2O95140 757 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 OPN1SWP03999 348 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 CDH2P19022 906 aaPredicted RBP13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 CBLP22681 906 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 OR1Q1Q15612 314 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 C3orf36Q3SXR2 165 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 TBRG1Q3YBR2 411 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 REP15Q6BDI9 236 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 NANOGP8Q6NSW7 305 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 CGB2Q6NT52 195 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 ULK3Q6PHR2 472 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 CREB3L2Q70SY1 520 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 PATL1Q86TB9 770 aaKnown RBP13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 PTOV1Q86YD1 416 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 C10orf53Q8N6V4 93 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 OR1K1Q8NGR3 316 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 SLC47A1Q96FL8 570 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 SORCS2Q96PQ0 1159 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 KCNS3Q9BQ31 491 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 CCDC134Q9H6E4 229 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 KAT8Q9H7Z6 458 aaKnown RBP13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 NANOGQ9H9S0 305 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 MOV10Q9HCE1 1003 aaKnown RBP13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 CRNNQ9UBG3 495 aaPredicted RBP13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 SVEP1Q4LDE5 3571 aa13.15□□□□□ -0.3
IGHV3-35-201ENST00000390617 ARPC4-TTLL3A0A0A6YYG9 625 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 BBIP1A8MTZ0 92 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 OR2T1O43869 369 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 NPIPB7O75200 414 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 CRYAAP02489 173 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 HTR2AP28223 471 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 NR4A2P43354 598 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 SELENOPP49908 381 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 C1DQ13901 141 aaKnown RBP13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 FAM166AQ6J272 317 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 LSMEM1Q8N8F7 131 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 MFSD8Q8NHS3 518 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 VANGL1Q8TAA9 524 aaPredicted RBP13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 MAGEE2Q8TD90 523 aaPredicted RBP13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 SLC38A4Q969I6 547 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 KTI12Q96EK9 354 aaPredicted RBP13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 ALKBH3Q96Q83 286 aaPredicted RBP13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 MCHR1Q99705 422 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 EVA1AQ9H8M9 152 aa13.14□□□□□ -0.31
IGHV3-35-201ENST00000390617 C12orf10Q9HB07 376 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms