RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 PCGF3Q3KNV8 242 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 SFRP4Q6FHJ7 346 aaPredicted RBP9.45□□□□□ -0.9
PKP4-201ENST00000389757 RTL6Q6ICC9 239 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 ST8SIA1Q92185 356 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 CCDC32Q9BV29 185 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 SEMA4GQ9NTN9 838 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 SHANK3Q9BYB0 1731 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 PMS2P1A4D2B8 440 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 M0R082 166 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 CREBL2O60519 120 aaPredicted RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 CBX7O95931 251 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 RBM39Q14498 530 aaKnown RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 TBCEQ15813 527 aaPredicted RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 DLEU7Q6UYE1 221 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 PRICKLE2Q7Z3G6 844 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 LINC00346Q8IVM7 164 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 MRPL41Q8IXM3 137 aaKnown RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 ADGRF3Q8IZF5 1079 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 PSMF1Q92530 271 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 ZC3HAV1LQ96H79 300 aaKnown RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 OR2A14Q96R47 310 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 CHST11Q9NPF2 352 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 EDARQ9UNE0 448 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 ZNF831Q5JPB2 1677 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 FRG2CA6NGY1 282 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 MAKP20794 623 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 C21orf33P30042 268 aaPredicted RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 MTCP1P56278 107 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 DUSP8Q13202 625 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 DND1Q8IYX4 353 aaKnown RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 GJC3Q8NFK1 279 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 OR51E2Q9H255 320 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 RGPD4Q7Z3J3 1758 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 PIP5K1CO60331 668 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 TP53P04637 393 aaPredicted RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 RPL27P61353 136 aaKnown RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 RNF4P78317 190 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 MPEG1Q2M385 716 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 TCTN3Q6NUS6 607 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 NPSR1Q6W5P4 371 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 PM20D2Q8IYS1 436 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 SYNPRQ8TBG9 265 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 SLC7A13Q8TCU3 470 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 UTP4Q969X6 686 aaKnown RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 C12orf4Q9NQ89 552 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 DECR2Q9NUI1 292 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 OR2A25A4D2G3 310 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 B4GAT1O43505 415 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 ETHE1O95571 254 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 DUSP7Q16829 419 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 COL13A1Q5TAT6 717 aaPredicted RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 PXKQ7Z7A4 578 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 GDPD1Q8N9F7 314 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 EXD3Q8N9H8 876 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 ASCC1Q8N9N2 400 aaKnown RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 OR2I1PQ8NGU4 316 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 ADAMTS14Q8WXS8 1223 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 TRIB1Q96RU8 372 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 APMAPQ9HDC9 416 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 B3GNT2Q9NY97 397 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 CTSFQ9UBX1 484 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 MCM3APO60318 1980 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 UPK1AO00322 258 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 RAB3DO95716 219 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 KNG1P01042 644 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 IGHV3-9P01782 118 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 MRPS10P82664 201 aaKnown RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 KDM8Q8N371 416 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 OR13C9Q8NGT0 318 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 IL1F10Q8WWZ1 152 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 COG8Q96MW5 612 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 TP63Q9H3D4 680 aaPredicted RBP9.44□□□□□ -0.9
PKP4-201ENST00000389757 RDH8Q9NYR8 311 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 ENPP5Q9UJA9 477 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 PROCRQ9UNN8 238 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 CNTRLQ7Z7A1 2325 aa9.44□□□□□ -0.9
PKP4-201ENST00000389757 TRGV8A0A0C4DH27 118 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 A0A1W2PPC1 479 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 ZNF891A8MT65 544 aaPredicted RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 CAPNS1P04632 268 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 SERPINE2P07093 398 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 IL2RGP31785 369 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 UQCRC1P31930 480 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 BDH1Q02338 343 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 CMPK2Q5EBM0 449 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 OR2G6Q5TZ20 316 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 SLX4IPQ5VYV7 408 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 RAB12Q6IQ22 244 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 ESPNLQ6ZVH7 1005 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 SPRED2Q7Z698 418 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 CARFQ8N187 725 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 NUDT8Q8WV74 236 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 TTC9Q92623 222 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 RASD2Q96D21 266 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 Q96M85 177 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 ZNF582Q96NG8 517 aaPredicted RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 UBQLN3Q9H347 655 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 RASD1Q9Y272 281 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 ZNF736B4DX44 427 aaPredicted RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 CSF1P09603 554 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms