RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 OR11G2Q8NGC1 345 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 MRGPRX4Q96LA9 322 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 DDA1Q9BW61 102 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 OR11A1Q9GZK7 315 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 RYDENQ9NUL5 291 aaKnown RBP22.78■■□□□ 1.24
SHOX2-201ENST00000389589 SULT1C4O75897 302 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 F8A1P23610 371 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 CASP3P42574 277 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 SNTA1Q13424 505 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 CCDC157Q569K6 752 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 SPANXN2Q5MJ10 180 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 ARSKQ6UWY0 536 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 Q6ZNX1 250 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 DDIT4LQ96D03 193 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 CEP19Q96LK0 163 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 SNX18Q96RF0 628 aa22.77■■□□□ 1.24
SHOX2-201ENST00000389589 NSG1A0A0A6YYJ2 146 aa22.77■■□□□ 1.23
SHOX2-201ENST00000389589 C11orf98E9PRG8 122 aa22.77■■□□□ 1.23
SHOX2-201ENST00000389589 XKRYO14609 159 aa22.77■■□□□ 1.23
SHOX2-201ENST00000389589 TRIM3O75382 744 aaPredicted RBP22.77■■□□□ 1.23
SHOX2-201ENST00000389589 ZNF806P0C7X5 589 aa22.77■■□□□ 1.23
SHOX2-201ENST00000389589 INSM1Q01101 510 aaPredicted RBP22.77■■□□□ 1.23
SHOX2-201ENST00000389589 HNRNPA0Q13151 305 aaKnown RBP22.77■■□□□ 1.23
SHOX2-201ENST00000389589 MFSD8Q8NHS3 518 aa22.77■■□□□ 1.23
SHOX2-201ENST00000389589 SNX33Q8WV41 574 aa22.77■■□□□ 1.23
SHOX2-201ENST00000389589 LIN37Q96GY3 246 aaPredicted RBP22.77■■□□□ 1.23
SHOX2-201ENST00000389589 VDAC3Q9Y277 283 aa22.77■■□□□ 1.23
SHOX2-201ENST00000389589 FTCDNL1E5RQL4 147 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 E9PI62 339 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 PLPP3O14495 311 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 SELENOFO60613 162 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 CBFA2T3O75081 653 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 PYCR1P32322 319 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 GBX2P52951 348 aaPredicted RBP22.76■■□□□ 1.23
SHOX2-201ENST00000389589 HCCSP53701 268 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 RPL27P61353 136 aaKnown RBP22.76■■□□□ 1.23
SHOX2-201ENST00000389589 SF3A2Q15428 464 aaKnown RBP22.76■■□□□ 1.23
SHOX2-201ENST00000389589 TMEM81Q6P7N7 255 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 ARL9Q6T311 187 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 CCDC190Q86UF4 302 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 DND1Q8IYX4 353 aaKnown RBP22.76■■□□□ 1.23
SHOX2-201ENST00000389589 SYT14Q8NB59 555 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 CHPT1Q8WUD6 406 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 AP3S1Q92572 193 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 TXNIPQ9H3M7 391 aa22.76■■□□□ 1.23
SHOX2-201ENST00000389589 CTDSP2O14595 271 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 IGHMP01871 453 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 RAB40ALP0C0E4 278 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 FOXF1Q12946 379 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 TMEM91Q6ZNR0 172 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 SLC16A9Q7RTY1 509 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 NEIL3Q8TAT5 605 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 THAP4Q8WY91 577 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 DNAJA3Q96EY1 480 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 CDC6Q99741 560 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 NCDNQ9UBB6 729 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 C4orf47A7E2U8 309 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 CASKO14936 926 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 CELA2AP08217 269 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 CLEC2LP0C7M8 214 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 JMJD7P0C870 316 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 AHCYP23526 432 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 PLPPR5Q32ZL2 321 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 TP53I3Q53FA7 332 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 SLC6A19Q695T7 634 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 DMKNQ6E0U4 476 aaPredicted RBP22.75■■□□□ 1.23
SHOX2-201ENST00000389589 RFLNBQ8N5W9 214 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 PARP16Q8N5Y8 322 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 SCAIQ8N9R8 606 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 ZNF417Q8TAU3 575 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 DCLRE1CQ96SD1 692 aaKnown RBP22.75■■□□□ 1.23
SHOX2-201ENST00000389589 ZNF587Q96SQ5 575 aaPredicted RBP22.75■■□□□ 1.23
SHOX2-201ENST00000389589 POTEKPQ9BYX7 375 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 SRA1Q9HD15 236 aaKnown RBP22.75■■□□□ 1.23
SHOX2-201ENST00000389589 PISDQ9UG56 409 aa22.75■■□□□ 1.23
SHOX2-201ENST00000389589 CHCHD2Q9Y6H1 151 aaPredicted RBP22.75■■□□□ 1.23
SHOX2-201ENST00000389589 CD8B2A6NJW9 211 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 FAM47E-STBD1D6RA91 191 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 ARHGEF9O43307 516 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 GALR2O43603 387 aaPredicted RBP22.74■■□□□ 1.23
SHOX2-201ENST00000389589 DLGAP3O95886 979 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 CD8BP10966 210 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 ACKR1Q16570 336 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 EEF1A1P5Q5VTE0 462 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 CDCP2Q5VXM1 449 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 EGFL6Q8IUX8 553 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 OR2M3Q8NG83 312 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 TSSK2Q96PF2 358 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 QPCTLQ9NXS2 382 aa22.74■■□□□ 1.23
SHOX2-201ENST00000389589 PLEKHB1Q9UF11 243 aaPredicted RBP22.74■■□□□ 1.23
SHOX2-201ENST00000389589 OGG1O15527 345 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 GTF2E2P29084 291 aaKnown RBP22.73■■□□□ 1.23
SHOX2-201ENST00000389589 ACVR1BP36896 505 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 ZP4Q12836 540 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 MS4A15Q8N5U1 240 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 ZNF248Q8NDW4 579 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 ZNF519Q8TB69 540 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 ASB15Q8WXK1 588 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 WDFY2Q96P53 400 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 NPAS1Q99742 590 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms